RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZSCAN4Q8NAM6 433 aaPredicted RBP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 OR1J1Q8NGS3 322 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 OR6S1Q8NH40 331 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 SLC25A43Q8WUT9 341 aaPredicted RBP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 RNF133Q8WVZ7 376 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 KCNIP1Q9NZI2 227 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 MYOTQ9UBF9 498 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 IGLV1-36A0A0B4J1U3 117 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 C5orf49A4QMS7 147 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 IL2RGP31785 369 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 FHITP49789 147 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 DVL1P1P54792 670 aaPredicted RBP10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 C1orf53Q5VUE5 145 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 GUSBP11Q6P575 273 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 GFOD1Q9NXC2 390 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 SERPINA7P05543 415 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 RAC2P15153 192 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 DUSP3P51452 185 aaPredicted RBP10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 SPATA46Q5T0L3 261 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 ETV3LQ6ZN32 361 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 MRPL41Q8IXM3 137 aaKnown RBP10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 AGBL5Q8NDL9 886 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 ASB13Q8WXK3 278 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 SLX1AQ9BQ83 275 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF426Q9BUY5 554 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 B4GALT7Q9UBV7 327 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 RNF150Q9ULK6 438 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 NOTCH4Q99466 2003 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF816-ZNF321PA0A0X1KG74 233 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 APLNRP35414 380 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 OSR2Q8N2R0 312 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 HLA-CQ95604 372 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 GPX7Q96SL4 187 aaPredicted RBP10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 NRIP2Q9BQI9 281 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 PECRQ9BY49 303 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 LPAR5Q9H1C0 372 aa10.97□□□□□ -0.65
SNRNP48-201ENST00000342415 TRAV14DV4A0A0A6YYC5 116 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 LIPT2A6NK58 231 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 E9PQ18 207 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 GRPP07492 148 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 ZXDAP98168 799 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 NHLH2Q02577 135 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 SSX9Q7RTT3 188 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 OR5C1Q8NGR4 320 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 INTS12Q96CB8 462 aaKnown RBP10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 VWCEQ96DN2 955 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 BRCA2P51587 3418 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 PCNX1Q96RV3 2341 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 GEMIN2O14893 280 aaKnown RBP10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 LY86O95711 162 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 ACTL6AO96019 429 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 HOXC4P09017 264 aaPredicted RBP10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 BMP5P22003 454 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 UBE2NP61088 152 aaKnown RBP10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 PCBD1P61457 104 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 PMP22Q01453 160 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 ANKRD55Q3KP44 614 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 OR10D4PQ8NGN7 298 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 USB1Q9BQ65 265 aaKnown RBP10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 GCM1Q9NP62 436 aa10.96□□□□□ -0.65
SNRNP48-201ENST00000342415 A0A0C4DFX4 3053 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 TRAV39A0A0B4J263 110 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 A8MXK9 166 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 TSTD3H0UI37 97 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 MASP2O00187 686 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 GPR137BO60478 399 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 DXOO77932 396 aaKnown RBP10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 POU2F2P09086 479 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 OR56B2PQ8NGI1 322 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 LANCL2Q9NS86 450 aa10.96□□□□□ -0.66
SNRNP48-201ENST00000342415 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 DHRS3O75911 302 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 CD1AP06126 327 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF32P17041 273 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 PNLIPRP3Q17RR3 467 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 PIGYQ3MUY2 71 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 WIPI1Q5MNZ9 446 aaPredicted RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 FGF11Q92914 225 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 P4HTMQ9NXG6 502 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 PHOX2AO14813 284 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 TFAP2EQ6VUC0 442 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 LINC00518Q8N0U6 118 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 OR11L1Q8NGX0 322 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 PP6455Q8WZ26 134 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 GDF15Q99988 308 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 ADAM19Q9H013 955 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 OBP2BQ9NPH6 170 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 MIOXQ9UGB7 285 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 ANXA10Q9UJ72 324 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 WASF3Q9UPY6 502 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 IGHV1OR15-9A0A0B4J2B8 117 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF727A8MUV8 499 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 MDKP21741 143 aaPredicted RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 AADACP22760 399 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 LPAR6P43657 344 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms