RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 AKR1C1Q04828 323 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 AAED1Q7RTV5 226 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 SVBPQ8N300 66 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 BORCS8Q96FH0 119 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 TSNAXQ99598 290 aaKnown RBP12.65□□□□□ -0.38
TDP2-201ENST00000341060 FAAP24Q9BTP7 215 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 TUBD1Q9UJT1 453 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 PADI1Q9ULC6 663 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 TERTO14746 1132 aaKnown RBP12.65□□□□□ -0.38
TDP2-201ENST00000341060 CHATP28329 748 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 HTR5AP47898 357 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 ZNF169Q14929 603 aaPredicted RBP12.65□□□□□ -0.38
TDP2-201ENST00000341060 IAH1Q2TAA2 248 aaPredicted RBP12.65□□□□□ -0.38
TDP2-201ENST00000341060 PDSS1Q5T2R2 415 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 RIPPLY2Q5TAB7 128 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 IL34Q6ZMJ4 242 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 ZNF100Q8IYN0 542 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 FNDC9Q8TBE3 224 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 FOXB1Q99853 325 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 RGCCQ9H4X1 137 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 OR2S2Q9NQN1 319 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 LRRC3CA6NJW4 275 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 ATP6V1G2-DDX39BF2Z307 99 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 CXCL13O43927 109 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PLATP00750 562 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 NRASP01111 189 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 FCGR3AP08637 254 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 RFPL3SP0C7P2 107 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 HKR1P10072 659 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 ICAM2P13598 275 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 ZNF708P17019 499 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 PSG4Q00888 419 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 Q0VFX4 171 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 C10orf91Q5T1B1 145 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 DHRS11Q6UWP2 260 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PPP1R32Q7Z5V6 425 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 OR4A4PQ8NGN8 299 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 SMIM8Q96KF7 97 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 CMSS1Q9BQ75 279 aaKnown RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 SULT4A1Q9BR01 284 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 LIME1Q9H400 295 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 ZNF581Q9P0T4 197 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PRELID1Q9Y255 219 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PCSK5Q92824 1860 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 GPR179Q6PRD1 2367 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 hCG_38984A0A1B0GV85 526 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 GPR31O00270 319 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PATE4P0C8F1 98 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 SP9P0CG40 484 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PRSS12P56730 875 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 RPS18P62269 152 aaKnown RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 MST1LQ2TV78 715 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 CEACAM16Q2WEN9 425 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PABPC1L2AQ5JQF8 200 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 TMEM200AQ86VY9 491 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 OR5T2Q8NGG2 359 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 OR10D3Q8NH80 312 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 OR2H1Q9GZK4 316 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 TAF9BQ9HBM6 251 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 IL36GQ9NZH8 169 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
TDP2-201ENST00000341060 TCFL5Q9UL49 500 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 TIMM10BQ9Y5J6 103 aa12.64□□□□□ -0.39
TDP2-201ENST00000341060 SHANK1Q9Y566 2161 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 DEDDO75618 318 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 RRADP55042 308 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 SPEM2Q0P670 501 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 EIF5AL1Q6IS14 154 aaKnown RBP12.63□□□□□ -0.39
TDP2-201ENST00000341060 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 FOXRED2Q8IWF2 684 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 OR10AD1Q8NGE0 317 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 OR2V1Q8NHB1 315 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 AIFM2Q9BRQ8 373 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 WNT5BQ9H1J7 359 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 SMOC1Q9H4F8 434 aa12.63□□□□□ -0.39
TDP2-201ENST00000341060 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
TDP2-201ENST00000341060 CARHSP1Q9Y2V2 147 aaKnown RBP12.63□□□□□ -0.39
TDP2-201ENST00000341060 IGKV1-12A0A0C4DH73 117 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 ZNF850A8MQ14 1090 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 B4E171 279 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 GEMIN2O14893 280 aaKnown RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 IFNA21P01568 189 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 IGKV1D-12P01611 117 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 OTX2P32243 289 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 OPRM1P35372 400 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 TSPAN7P41732 249 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 PIGPP57054 158 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 PCBD1P61457 104 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms