RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 VSTM5A8MXK1 200 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 RAB27BO00194 218 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 RBBP9O75884 186 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 PTTG1O95997 202 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 GRPP07492 148 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 GSTT2BP0CG30 244 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 GDNFP39905 211 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 NKX6-1P78426 367 aaPredicted RBP14.8□□□□□ -0.04
CLDN4-201ENST00000340958 CD300CQ08708 224 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 ASAH1Q13510 395 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 Q6ZTK2 550 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 OSR2Q8N2R0 312 aa14.8□□□□□ -0.04
CLDN4-201ENST00000340958 IGKV1-12A0A0C4DH73 117 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 LRP5LA4QPB2 252 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 WIPF3A6NGB9 483 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 TUBAL3A6NHL2 446 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 H0YL77 283 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 SOCS1O15524 211 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 IGKV1D-12P01611 117 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 ZNF250P15622 560 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 GNB3P16520 340 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 SRP9P49458 86 aaKnown RBP14.79□□□□□ -0.04
CLDN4-201ENST00000340958 AP3S2P59780 193 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 MZT1Q08AG7 82 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 ADAM5Q6NVV9 412 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 ASCL4Q6XD76 172 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 LRP11Q86VZ4 500 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 SAXO1Q8IYX7 474 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 NUP37Q8NFH4 326 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 TMEM171Q8WVE6 324 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 TRIM63Q969Q1 353 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 IL36GQ9NZH8 169 aa14.79□□□□□ -0.04
CLDN4-201ENST00000340958 IGHV3-64DA0A0J9YX35 117 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 MEIOCA2RUB1 952 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 MEIS3P1A6NDR6 274 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 TMEM235A6NFC5 223 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 ORC5O43913 435 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 ZG16O60844 167 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 ECDO95905 644 aaPredicted RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 SFTPBP07988 381 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 GRNP28799 593 aaKnown RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 BLVRBP30043 206 aaPredicted RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 SORDQ00796 357 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 CDSNQ15517 529 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 TMEM255AQ5JRV8 349 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 NKAPLQ5M9Q1 402 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 SPERTQ8NA61 448 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 OR2Z1Q8NG97 314 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 ENKURQ8TC29 256 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 MRPS24Q96EL2 167 aaKnown RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 PLPPR2Q96GM1 343 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 NUDT16L1Q9BRJ7 211 aaKnown RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 C11orf54Q9H0W9 315 aaPredicted RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 CXXC4Q9H2H0 198 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 OR51I2Q9H344 312 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 CA10Q9NS85 328 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 KLK11Q9UBX7 282 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 ST3GAL6Q9Y274 331 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 FLNBO75369 2602 aaKnown RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 A0A0A6YYD4 124 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 LYRM1O43325 122 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 BCL3P20749 454 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 SNU13P55769 128 aaKnown RBP14.78□□□□□ -0.04
CLDN4-201ENST00000340958 GUCA2AQ02747 115 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 TAF9Q16594 264 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 NKPD1Q17RQ9 610 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 FBXL14Q8N1E6 418 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 TAAR3PQ9P1P4 343 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 ITGB1BP2Q9UKP3 347 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 POLDIP2Q9Y2S7 368 aa14.78□□□□□ -0.04
CLDN4-201ENST00000340958 A6NLC8 198 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 TMEM210A6NLX4 147 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 F5H5P2 479 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 J3QT63 122 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 SYNGR1O43759 233 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 IGHV3-13P01766 116 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 LPLP06858 475 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 CD3EP07766 207 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 NPBWR2P48146 333 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 EIF2B2P49770 351 aaKnown RBP14.77□□□□□ -0.05
CLDN4-201ENST00000340958 GNG2P59768 71 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 IL24Q13007 206 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 PIGYQ3MUY2 71 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 ZNF260Q3ZCT1 412 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 ARHGAP5-AS1Q96IT6 56 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 Q96M66 194 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 NEDD4LQ96PU5 975 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 TM2D1Q9BX74 207 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 PKIBQ9C010 78 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 SCPEP1Q9HB40 452 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 PLEKHJ1Q9NW61 149 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 CACNG2Q9Y698 323 aa14.77□□□□□ -0.05
CLDN4-201ENST00000340958 SULT1C2O00338 296 aa14.76□□□□□ -0.05
CLDN4-201ENST00000340958 PLA2G10O15496 165 aa14.76□□□□□ -0.05
CLDN4-201ENST00000340958 MLNRO43193 412 aa14.76□□□□□ -0.05
CLDN4-201ENST00000340958 CLDN14O95500 239 aa14.76□□□□□ -0.05
CLDN4-201ENST00000340958 FCER2P06734 321 aa14.76□□□□□ -0.05
CLDN4-201ENST00000340958 HIST1H1DP16402 221 aaKnown RBP14.76□□□□□ -0.05
CLDN4-201ENST00000340958 MSMPQ1L6U9 139 aa14.76□□□□□ -0.05
CLDN4-201ENST00000340958 PCGF3Q3KNV8 242 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms