RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 C1QTNF3-AMACRE9PGA6 284 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 F2Z2F3 143 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 NPPBP16860 134 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 GALR1P47211 349 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 PRLHRP49683 370 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 FAM3BP58499 235 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 TCF23Q7RTU1 214 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 CPEB2Q7Z5Q1 589 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 PRRT2Q7Z6L0 340 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 HOGA1Q86XE5 327 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 OR1N2Q8NGR9 330 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 SCAMP4Q969E2 229 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 AMELYQ99218 206 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 NUDT9Q9BW91 350 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 MS4A8Q9BY19 250 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 PLSCR4Q9NRQ2 329 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 LHX3Q9UBR4 397 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ABT1Q9ULW3 272 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 STRAPQ9Y3F4 350 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ARHGAP21Q5T5U3 1957 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 LMX1BO60663 402 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF205O95201 554 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 SERPINA7P05543 415 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 NGFRP08138 427 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ACRP10323 421 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ATP6V0CP27449 155 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 LGALS7P47929 136 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF157P51786 506 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF136P52737 540 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 SMAD3P84022 425 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 SSBP1Q04837 148 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 TMEM241Q24JQ0 296 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 CHST13Q8NET6 341 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 CMTM2Q8TAZ6 248 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 RTBDNQ9BSG5 229 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 RBM24Q9BX46 236 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 BCL2L10Q9HD36 194 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF443Q9Y2A4 671 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 MPDZO75970 2070 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 PDE4DIPQ5VU43 2346 aa8.49□□□□□ -1.05
PTCHD4-201ENST00000339488 SERPINE3A8MV23 424 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 TSPAN6O43657 245 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 PFN1P07737 140 aaKnown RBP8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 OR1Q1Q15612 314 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 SP6Q3SY56 376 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 ACTL10Q5JWF8 245 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 C1QL3Q5VWW1 255 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 SAMD13Q5VXD3 122 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 CLDND2Q8NHS1 167 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 GABRG3Q99928 467 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 WNT10AQ9GZT5 417 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 LPAR5Q9H1C0 372 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 ELL3Q9HB65 397 aaPredicted RBP8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 MANBALQ9NQG1 85 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 SOHLH2Q9NX45 425 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 MDC1Q14676 2089 aaKnown RBP8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 TRBV5-7A0A0A0MS05 114 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 A0A1W2PRS3 328 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 PDGFBP01127 241 aaPredicted RBP8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 FOLR1P15328 257 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 FAHP16930 419 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 CDKN2AP42771 156 aaKnown RBP8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 SCGB2A2Q13296 93 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 TRIM61Q5EBN2 209 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 WDR38Q5JTN6 314 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 ADAMTS15Q8TE58 950 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 DNAJB3Q8WWF6 145 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 VN1R1Q9GZP7 353 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 KIR3DX1Q9H7L2 352 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF665Q9H7R5 613 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 KIAA1456Q9P272 454 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 TBX21Q9UL17 535 aa8.48□□□□□ -1.05
PTCHD4-201ENST00000339488 TRAV30A0A087WSZ9 112 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 TRAV26-1A0A087WT03 109 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 K7ERU9 68 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 PTGER4P35408 488 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF83P51522 516 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 FFAR4Q5NUL3 377 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 SHISA2Q6UWI4 295 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 OR4D6Q8NGJ1 314 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 OR11L1Q8NGX0 322 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 OR2V1Q8NHB1 315 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 SLC2A12Q8TD20 617 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 ATP5SQ99766 215 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 MAGEH1Q9H213 219 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 SRA1Q9HD15 236 aaKnown RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 G6PC2Q9NQR9 355 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 LRIT1Q9P2V4 623 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 GPR132Q9UNW8 380 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 CCL15-CCL14A0A0B4J2E2 113 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 CXCL11O14625 94 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 HSPB1P04792 205 aaKnown RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 FKBP1BP68106 108 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 CCL15Q16663 113 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 DMRTC1Q5HYR2 192 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF506Q5JVG8 444 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms