RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OCSTAMPQ9BR26 566 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 PLEKHA6Q9Y2H5 1048 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 IGKV3-15P01624 115 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 SULT1A3P0DMM9 295 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 SULT1A4P0DMN0 295 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 ALKBH6Q3KRA9 238 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 C1orf162Q8NEQ5 155 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 OR1J1Q8NGS3 322 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 SLC25A40Q8TBP6 338 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 HS3ST6Q96QI5 342 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF701Q9NV72 531 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 C3orf80F5H4A9 247 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 FABP7O15540 132 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 BCL3P20749 454 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 UCP2P55851 309 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 IFITM2Q01629 132 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 NDUFA5Q16718 116 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 PRR30Q53SZ7 412 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF474Q6S9Z5 364 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 BHLHA15Q7RTS1 189 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 OR10AD1Q8NGE0 317 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 OR5P3Q8WZ94 311 aa19.23■□□□□ 0.67
PDLIM2-203ENST00000339162 ZZEF1O43149 2961 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 TMEM82A0PJX8 343 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 SERPINE3A8MV23 424 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 CREBL2O60519 120 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF626Q68DY1 528 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 BEND4Q6ZU67 534 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 IL36GQ9NZH8 169 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 ANAPC10Q9UM13 185 aa19.22■□□□□ 0.67
PDLIM2-203ENST00000339162 DLL1O00548 723 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 SYNGR1O43759 233 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 IFNA6P05013 189 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 IL5P05113 134 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 HOXB1P14653 301 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 AMY2BP19961 511 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 TDGF1P3P51864 188 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 P2RY6Q15077 328 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 ATPAF1Q5TC12 328 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 OR5A2Q8NGI9 324 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 PRRT1Q99946 306 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 SLC25A21Q9BQT8 299 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 SULT4A1Q9BR01 284 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 GPN1Q9HCN4 374 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 PLSCR3Q9NRY6 295 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 SH3BGRL2Q9UJC5 107 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 TLN1Q9Y490 2541 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 OR2AT4A6NND4 320 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 MSTNO14793 375 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 CECR9P0C854 216 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 C4orf46Q504U0 113 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 HAGHLQ6PII5 290 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 FBXW12Q6X9E4 464 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 UXS1Q8NBZ7 420 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 EMG1Q92979 244 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 MTCH1Q9NZJ7 389 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 IL36RNQ9UBH0 155 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 AK3Q9UIJ7 227 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 VSIG4Q9Y279 399 aa19.21■□□□□ 0.67
PDLIM2-203ENST00000339162 IGKV1D-8A0A087WSZ0 117 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 SDCBPO00560 298 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 RGS13O14921 159 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 NAT1P18440 290 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 S100A1P23297 94 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 PTGER4P35408 488 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 DAZAP2Q15038 168 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 MUC20Q8N307 709 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 MED30Q96HR3 178 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 ZNF488Q96MN9 340 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 CA10Q9NS85 328 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 ZGRF1Q86YA3 2104 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 IGHV3-64DA0A0J9YX35 117 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 FAM221AA4D161 298 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 OR5H1A6NKK0 313 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 C1QBP02746 253 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 ANXA3P12429 323 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 CHATP28329 748 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 TIMP3P35625 211 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 RBM11P57052 281 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 TMPRSS3P57727 454 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 HOGA1Q86XE5 327 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 SLC7A5P1Q8MH63 180 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 ZSCAN4Q8NAM6 433 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 BOD1Q96IK1 185 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 SLC2A8Q9NY64 477 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 TINAGQ9UJW2 476 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 MPC1Q9Y5U8 109 aa19.2■□□□□ 0.66
PDLIM2-203ENST00000339162 OR7C1O76099 320 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 CRHP06850 196 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 GLI4P10075 376 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 MPV17P39210 176 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 DOLPP1Q86YN1 238 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 SNRNP40Q96DI7 357 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 CHIAQ9BZP6 476 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 MGAT4CQ9UBM8 478 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 MEIKINA0A087WXM9 373 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 UBE2QL1A1L167 161 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 ZNF35P13682 527 aa19.19■□□□□ 0.66
PDLIM2-203ENST00000339162 CBX5P45973 191 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms