RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OR2Z1Q8NG97 314 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR56B1Q8NGI3 324 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 FCAMRQ8WWV6 532 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NEUROG1Q92886 237 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 Q96M66 194 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TM2D1Q9BX74 207 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF442Q9H7R0 627 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PCDHB16Q9NRJ7 776 aa12.54□□□□□ -0.4
CDK5RAP3-201ENST00000338399 A0A1B0GWJ7 208 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZSCAN5BA6NJL1 495 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 F8VVB4 439 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 F8VWA3 439 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TRAPPC2LH3BP13 241 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 J3QT63 122 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CDIPTO14735 213 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RHBDL1O75783 438 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 OR4A8P0C604 315 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CPT2P23786 658 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GABRR1P24046 479 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MPZP25189 248 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 DEFA1P59665 94 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 DEFA3P59666 94 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GUCA2AQ02747 115 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 IL24Q13007 206 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF260Q3ZCT1 412 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CDNFQ49AH0 187 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 BEX5Q5H9J7 111 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF57Q68EA5 555 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 FBXL14Q8N1E6 418 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SPERTQ8NA61 448 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 AQP3Q92482 292 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ZNF488Q96MN9 340 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 RBFOX1Q9NWB1 397 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SPTBN1Q01082 2364 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TMEM235A6NFC5 223 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ORC5O43913 435 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PLAUP00749 431 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 GNB3P16520 340 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 BLVRBP30043 206 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PRSS3P35030 304 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 SRP9P49458 86 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 TAF9Q16594 264 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NKPD1Q17RQ9 610 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 Q6ZTK2 550 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 CYYR1Q96J86 154 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 NUDT16L1Q9BRJ7 211 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 ST3GAL6Q9Y274 331 aa12.53□□□□□ -0.4
CDK5RAP3-201ENST00000338399 MEIS3P1A6NDR6 274 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 E7EQL1 145 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C3orf80F5H4A9 247 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PLA2G10O15496 165 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SPRY3O43610 288 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PRAMEF6Q5VXH4 476 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ELP2Q6IA86 826 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 Q8NFD4 153 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MRPS24Q96EL2 167 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PIK3IP1Q96FE7 263 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ARHGAP5-AS1Q96IT6 56 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RNF115Q9Y4L5 304 aa12.52□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FOXI3A8MTJ6 420 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 VSTM5A8MXK1 200 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GEMIN2O14893 280 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GDNFP39905 211 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SNU13P55769 128 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RBM11P57052 281 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C11orf53Q8IXP5 236 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SETD6Q8TBK2 473 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PPP1R14BQ96C90 147 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 UFSP2Q9NUQ7 469 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ZNF581Q9P0T4 197 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 POLDIP2Q9Y2S7 368 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ROS1P08922 2347 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 A6NLC8 198 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PYCARD-AS1I3L0S3 204 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PRKACAP17612 351 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 KIR2DL3P43628 341 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ZNF81P51508 661 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FGF12P61328 243 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MZT1Q08AG7 82 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ASAH1Q13510 395 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PDCD1Q15116 288 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MPPED2Q15777 294 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 OLFML2AQ68BL7 652 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SIGIRRQ6IA17 410 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms