RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
RTN4-202ENST00000337526 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 SIRT4Q9Y6E7 314 aaPredicted RBP12.21□□□□□ -0.45
RTN4-202ENST00000337526 A0A1W2PPH5 198 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 MED19A0JLT2 244 aaPredicted RBP12.21□□□□□ -0.45
RTN4-202ENST00000337526 FAM24AA6NFZ4 105 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 ADAM20O43506 726 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 PATE4P0C8F1 98 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 ERHP84090 104 aaKnown RBP12.21□□□□□ -0.45
RTN4-202ENST00000337526 PABPC1L2AQ5JQF8 200 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 OR5M9Q8NGP3 310 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 CES1P1Q9UKY3 287 aa12.21□□□□□ -0.45
RTN4-202ENST00000337526 TNFSF14O43557 240 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 GCM2O75603 506 aaPredicted RBP12.21□□□□□ -0.46
RTN4-202ENST00000337526 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.21□□□□□ -0.46
RTN4-202ENST00000337526 OR8B12Q8NGG6 310 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 ZNF251Q9BRH9 671 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 C7orf66A4D0T2 115 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 K7EQS6 105 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 PRDX4Q13162 271 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 IL11RAQ14626 422 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 CLEC9AQ6UXN8 241 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 CARFQ8N187 725 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 BVESQ8NE79 360 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 OR6X1Q8NH79 312 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 ASB5Q8WWX0 329 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 TAAR6Q96RI8 345 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 P4HTMQ9NXG6 502 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 DOCK5Q9H7D0 1870 aa12.21□□□□□ -0.46
RTN4-202ENST00000337526 ARFGEF1Q9Y6D6 1849 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 SOCS1O15524 211 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 TNFSF15O95150 251 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 CLEC18BQ6UXF7 455 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
RTN4-202ENST00000337526 BOD1Q96IK1 185 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 RAB40CQ96S21 281 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 WDR13Q9H1Z4 485 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 ZDHHC11Q9H8X9 412 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 C3orf85A0A1B0GTC6 90 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 FABP1P07148 127 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
RTN4-202ENST00000337526 PRSS12P56730 875 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 LSM2Q9Y333 95 aaKnown RBP12.2□□□□□ -0.46
RTN4-202ENST00000337526 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 CLDN34H7C241 214 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 DVL1O14640 695 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 ADH4P08319 380 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 MPGP29372 298 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 RHBDD2Q6NTF9 364 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 SIGLECL1Q8N7X8 197 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 FAM173AQ9BQD7 235 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 ZNF426Q9BUY5 554 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 UQCC1Q9NVA1 299 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 CACFD1Q9UGQ2 172 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 ADAMTSL1Q8N6G6 1762 aa12.2□□□□□ -0.46
RTN4-202ENST00000337526 TMEM30CPA0ZSE6 113 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 PRRG2O14669 202 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 GPR37O15354 613 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 NGFP01138 241 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 CT45A10P0DMU9 189 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 IL13RA2Q14627 380 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 PLAC9Q5JTB6 97 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 Q8IYB0 196 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 MRPS24Q96EL2 167 aaKnown RBP12.19□□□□□ -0.46
RTN4-202ENST00000337526 NMES1Q9C002 83 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 SLC35D1Q9NTN3 355 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 ANXA10Q9UJ72 324 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 IGHV1OR15-9A0A0B4J2B8 117 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 YIF1AO95070 293 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 ACER2Q5QJU3 275 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 NUBPLQ8TB37 319 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 GPR137Q96N19 417 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 ZPBPQ9BS86 351 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 SBF2Q86WG5 1849 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 A0A1W2PQD3 144 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
RTN4-202ENST00000337526 C1orf53Q5VUE5 145 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 TMEM52Q8NDY8 209 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 ASB10Q8WXI3 467 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 LRRC3BQ96PB8 259 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 IFT22Q9H7X7 185 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 ZFP64Q9NPA5 681 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 LINC00862A6NCI5 91 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 PTP4A3O75365 173 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 MOSPD3O75425 235 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 TMIGD3P0DMS9 266 aaPredicted RBP12.19□□□□□ -0.46
RTN4-202ENST00000337526 RAB13P51153 203 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 NXPH1P58417 271 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 SKP2Q13309 424 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 RFESDQ8TAC1 157 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 PLA2G3Q9NZ20 509 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 PCOLCE2Q9UKZ9 415 aa12.19□□□□□ -0.46
RTN4-202ENST00000337526 CSRP3P50461 194 aa12.18□□□□□ -0.46
RTN4-202ENST00000337526 OR10D3Q8NH80 312 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms