RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HIST2H3AQ71DI3 136 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 C17orf78Q8N4C9 275 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 ZSCAN4Q8NAM6 433 aaPredicted RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 OR10AD1Q8NGE0 317 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 CDC6Q99741 560 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 FGF23Q9GZV9 251 aaPredicted RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 CADP27708 2225 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 hCG_1807616A0A1W2PRN6 198 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 MED19A0JLT2 244 aaPredicted RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 GSTP1P09211 210 aaKnown RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 NAT2P11245 290 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 CPT2P23786 658 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 RBP2P50120 134 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 PPIAP62937 165 aaKnown RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 DHODHQ02127 395 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 SCRN3Q0VDG4 424 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 TUSC1Q2TAM9 212 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 ABLIM2Q6H8Q1 611 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 JMJD6Q6NYC1 403 aaPredicted RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 RPUSD3Q6P087 351 aaKnown RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 SLC22A25Q6T423 547 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 OR2W3Q7Z3T1 314 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 DEFB124Q8NES8 71 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 OR5T2Q8NGG2 359 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 OR5L1Q8NGL2 311 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 OR1S1Q8NH92 325 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 KCNE4Q8WWG9 221 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 PP6455Q8WZ26 134 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 EMG1Q92979 244 aaKnown RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 GPR132Q9UNW8 380 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 TIMM10BQ9Y5J6 103 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 TEX13DA0A0J9YY54 714 aaPredicted RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 KANTRA0A1W2PQU2 76 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 OR6C6A6NF89 314 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 NR2C1P13056 603 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 HAAOP46952 286 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ASCL1P50553 236 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CCL11P51671 97 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 RAB32Q13637 225 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ZNF611Q8N823 705 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 OR52H1Q8NGJ2 320 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 THAP6Q8TBB0 222 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 SUN5Q8TC36 379 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CPT1CQ8TCG5 803 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CPNE4Q96A23 557 aaPredicted RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 WBP1Q96G27 269 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 Q96M66 194 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CMSS1Q9BQ75 279 aaKnown RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 SPRY4Q9C004 299 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ALX4Q9H161 411 aaPredicted RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 TMEM231Q9H6L2 316 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ZNF442Q9H7R0 627 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 TNFSF18Q9UNG2 199 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 KCNMB2Q9Y691 235 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ANKRD11Q6UB99 2663 aaPredicted RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 HMSDA8MTL9 139 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CYTIPO60759 359 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CELA3BP08861 270 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CST2P09228 141 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CTSSP25774 331 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ERVS71-1P61550 626 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 BTN1A1Q13410 526 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 IGSF11Q5DX21 431 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CLVS2Q5SYC1 327 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 PDSS1Q5T2R2 415 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 PXDC1Q5TGL8 231 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 OR5AP2Q8NGF4 316 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 OR5M9Q8NGP3 310 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 NEK7Q8TDX7 302 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 FAM173AQ9BQD7 235 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 SF3B5Q9BWJ5 86 aaKnown RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 REG4Q9BYZ8 158 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 METTL9Q9H1A3 318 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 ZNF552Q9H707 407 aaPredicted RBP7.65□□□□□ -1.18
SNCA-201ENST00000336904 FAM86C1Q9NVL1 165 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 SLC2A8Q9NY64 477 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 LUZP4Q9P127 313 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 LHX6Q9UPM6 363 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 STARD10Q9Y365 291 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 CACNA1DQ01668 2161 aa7.65□□□□□ -1.18
SNCA-201ENST00000336904 hCG_38984A0A1B0GV85 526 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 DUS4LO95620 317 aaKnown RBP7.65□□□□□ -1.19
SNCA-201ENST00000336904 DIRAS3O95661 229 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 TFF1P04155 84 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 MMP7P09237 267 aaPredicted RBP7.65□□□□□ -1.19
SNCA-201ENST00000336904 RCC1P18754 421 aaPredicted RBP7.65□□□□□ -1.19
SNCA-201ENST00000336904 BCL3P20749 454 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 FKBP2P26885 142 aaKnown RBP7.65□□□□□ -1.19
SNCA-201ENST00000336904 ARG2P78540 354 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 TMEM128Q5BJH2 165 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 RGS7BPQ6MZT1 257 aaPredicted RBP7.65□□□□□ -1.19
SNCA-201ENST00000336904 H3F3CQ6NXT2 135 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 ZNF100Q8IYN0 542 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 SCARB1Q8WTV0 552 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 TMED6Q8WW62 240 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 ESRP2Q9H6T0 727 aaKnown RBP7.65□□□□□ -1.19
SNCA-201ENST00000336904 ASF1BQ9NVP2 202 aa7.65□□□□□ -1.19
SNCA-201ENST00000336904 LSM5Q9Y4Y9 91 aaKnown RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms