RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 HMGN3Q15651 99 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 PINX1Q96BK5 328 aaKnown RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 PILRBQ9UKJ0 227 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 NGFP01138 241 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 MGST1P10620 155 aaKnown RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 BCL3P20749 454 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 GNG10P50151 68 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 DHODHQ02127 395 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 MGAT2Q10469 447 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 GGTLC2Q14390 218 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 AANATQ16613 207 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 RPUSD3Q6P087 351 aaKnown RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 SAP25Q8TEE9 199 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 FN3KRPQ9HA64 309 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF705FA8MVS1 300 aaPredicted RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 SFT2D2O95562 160 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF705DP0CH99 300 aaPredicted RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF705BP0CI00 300 aaPredicted RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 LSM6P62312 80 aaKnown RBP11.47□□□□□ -0.57
VSTM4-202ENST00000332853 DCAF10Q5QP82 559 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 KCNIP4Q6PIL6 250 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 C14orf79Q96F83 325 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 GPR35Q9HC97 309 aa11.47□□□□□ -0.57
VSTM4-202ENST00000332853 MED19A0JLT2 244 aaPredicted RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 GPR37O15354 613 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 KRASP01116 189 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 RRASP10301 218 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 TMEM267Q0VDI3 215 aaPredicted RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 ISXQ2M1V0 245 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 TSPO2Q5TGU0 170 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 OR10AD1Q8NGE0 317 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 PLEKHA2Q9HB19 425 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 ZNF629Q9UEG4 869 aaPredicted RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 A0A1W2PQM1 296 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 NAA40Q86UY6 237 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 CPEB3Q8NE35 698 aaKnown RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 NDRG3Q9UGV2 375 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 TMEM30CPA0ZSE6 113 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 GSTZ1O43708 216 aaPredicted RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 CRYBA2P53672 197 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 PXDC1Q5TGL8 231 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 CLEC9AQ6UXN8 241 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 SF3B5Q9BWJ5 86 aaKnown RBP11.46□□□□□ -0.57
VSTM4-202ENST00000332853 OR2H1Q9GZK4 316 aa11.46□□□□□ -0.57
VSTM4-202ENST00000332853 SPTBP11277 2137 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 A0A0J9YW62 118 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 A0A1W2PPH5 198 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 ADAM20O43506 726 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 OR5AC1P0C628 307 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 SSX2Q16385 188 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 S1PR3Q99500 378 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 QPCTLQ9NXS2 382 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 MTCH1Q9NZJ7 389 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 ADAP1O75689 374 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 SCAND1P57086 179 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 RAB32Q13637 225 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 OR11H7Q8NGC8 314 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 OR10P1Q8NGE3 313 aa11.46□□□□□ -0.58
VSTM4-202ENST00000332853 A0A1W2PR77 199 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 C3orf80F5H4A9 247 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 CYB5BO43169 146 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 UPK3AO75631 287 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 TMEM11P17152 192 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 RPS4Y1P22090 263 aaKnown RBP11.45□□□□□ -0.58
VSTM4-202ENST00000332853 PIGYQ3MUY2 71 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 PLA1AQ53H76 456 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 C9orf152Q5JTZ5 239 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 OR5AP2Q8NGF4 316 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 NARFLQ9H6Q4 476 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 ZNF705GA8MUZ8 300 aaPredicted RBP11.45□□□□□ -0.58
VSTM4-202ENST00000332853 ADAM10O14672 748 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 CTDSPLO15194 276 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 OR4D10Q8NGI6 311 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 OR10Z1Q8NGY1 313 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 C21orf140B9A014 251 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 UMAD1C9J7I0 102 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 LMX1BO60663 402 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 PDCD6O75340 191 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 HPXP02790 462 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 CTHRC1Q96CG8 243 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 TIMD4Q96H15 378 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 RAB33BQ9H082 229 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 WDR13Q9H1Z4 485 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 FAM90A27PA6NNH2 459 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 DXOO77932 396 aaKnown RBP11.45□□□□□ -0.58
VSTM4-202ENST00000332853 THY1P04216 161 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 CST2P09228 141 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 SSTP61278 116 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 TTTY12Q9BZ98 90 aa11.45□□□□□ -0.58
VSTM4-202ENST00000332853 PCDHGA9Q9Y5G4 932 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms