RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZNF254O75437 659 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 SLC2A1P11166 492 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ALOX5APP20292 161 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 SLC2A5P22732 501 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ATP6V1E1P36543 226 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 OPRL1P41146 370 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ECI1P42126 302 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF92Q03936 586 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 OR8G1Q15617 311 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 SNAI3Q3KNW1 292 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 GLYATL3Q5SZD4 288 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 C12orf73Q69YU5 71 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 FAM57BQ71RH2 274 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 OR8J1Q8NGP2 316 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 GATAD1Q8WUU5 269 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 RFKQ969G6 155 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 IL4I1Q96RQ9 567 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 CCL13Q99616 98 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 C9orf16Q9BUW7 83 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 GABARAPL3Q9BY60 117 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 DNAJC27Q9NZQ0 273 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 MRPL15Q9P015 296 aaKnown RBP11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
CTHRC1-201ENST00000330295 ACOD1A6NK06 481 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 SNTNA6NMZ2 147 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 VEGFCP49767 419 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 RAB13P51153 203 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 ALDH3A2P51648 485 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 LUMP51884 338 aaPredicted RBP11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF121P58317 390 aaPredicted RBP11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 TEX36Q5VZQ5 186 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 GCSAMQ8N6F7 178 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 FAM216BQ8N7L0 139 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 CSNK2A3Q8NEV1 391 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 OR2AE1Q8NHA4 323 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 TRUB1Q8WWH5 349 aaKnown RBP11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 ITFG2Q969R8 447 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 REEP6Q96HR9 211 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 S100A14Q9HCY8 104 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 BRD7Q9NPI1 651 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 C14orf119Q9NWQ9 140 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 USE1Q9NZ43 259 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 PITPNC1Q9UKF7 332 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 IKZF2Q9UKS7 526 aa11.8□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF670-ZNF695F2Z2N8 137 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 H3BNX3 289 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 EI24O14681 340 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 BAG2O95816 211 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 MRPL3P09001 348 aaKnown RBP11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 PSKH1P11801 424 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 CA6P23280 308 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 GNALP38405 381 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 RIDAP52758 137 aaKnown RBP11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 ELF3P78545 371 aaPredicted RBP11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 TMED1Q13445 227 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 BLMHQ13867 455 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 GFOD2Q3B7J2 385 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF829Q3KNS6 432 aaPredicted RBP11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 PLA1AQ53H76 456 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 AADACL4Q5VUY2 407 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 SLC36A1Q7Z2H8 476 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 SPSB4Q96A44 273 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 ADAT1Q9BUB4 502 aaKnown RBP11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 C1orf123Q9NWV4 160 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 HAO2Q9NYQ3 351 aa11.79□□□□□ -0.52
CTHRC1-201ENST00000330295 CCDC182A6NF36 153 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 NDUFB3O43676 98 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 ALPLP05186 524 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 EPHA2P29317 976 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 DCTDP32321 178 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 GP2P55259 537 aaKnown RBP11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 PSMA6P60900 246 aaKnown RBP11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 IKZF1Q13422 519 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 WDR38Q5JTN6 314 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 C10orf99Q6UWK7 81 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 ZBTB49Q6ZSB9 765 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF826PQ6ZT77 177 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 OVCH2Q7RTZ1 564 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 ZNF679Q8IYX0 411 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 PQLC1Q8N2U9 271 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 CBR4Q8N4T8 237 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 OR56B2PQ8NGI1 322 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 OR5D13Q8NGL4 314 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 OR8S1Q8NH09 359 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 FAM81AQ8TBF8 368 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 RPS4Y2Q8TD47 263 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 EME1Q96AY2 570 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 SGK3Q96BR1 496 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 AMELYQ99218 206 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 MYCBPQ99417 103 aaPredicted RBP11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 ABCB9Q9NP78 766 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 LRP12Q9Y561 859 aa11.78□□□□□ -0.52
CTHRC1-201ENST00000330295 TMEM269A0A1B0GVZ9 245 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 ANXA2P2A6NMY6 339 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 HTR1FP30939 366 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms