RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MVDP53602 400 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 TEX30Q5JUR7 227 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 ZBTB34Q8NCN2 500 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 SLC52A3Q9NQ40 469 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 CA6P23280 308 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 RHOUQ7L0Q8 258 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 OR52N4Q8NGI2 321 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 RHNO1Q9BSD3 238 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 RNF32Q9H0A6 362 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 PATZ1Q9HBE1 687 aaKnown RBP10.09□□□□□ -0.79
COL4A5-201ENST00000328300 OR5H14A6NHG9 310 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 UMAD1C9J7I0 102 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 LTBRP36941 435 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 BAK1Q16611 211 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 WNT2BQ93097 391 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 OTOFQ9HC10 1997 aa10.09□□□□□ -0.79
COL4A5-201ENST00000328300 A0A0U1RQV5 110 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 PRR33A8MZF0 331 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 HSD17B11Q8NBQ5 300 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 ST8SIA4Q92187 359 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 ADIPOR1Q96A54 375 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 RAB40CQ96S21 281 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 C16orf97H3BN30 126 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 HRKO00198 91 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 COX5BP10606 129 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 CD96P40200 585 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 TEX29Q8N6K0 151 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 PSENENQ9NZ42 101 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 ZNF724A8MTY0 619 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 SFT2D2O95562 160 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 FSTP19883 344 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 H3F3CQ6NXT2 135 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 CHRDL1Q9BU40 450 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 CHST5Q9GZS9 411 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 OR4C45A6NMZ5 311 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 NAT2P11245 290 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 CSF2RBP32927 897 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 ZFP36L2P47974 494 aaKnown RBP10.08□□□□□ -0.8
COL4A5-201ENST00000328300 LIMS1P48059 325 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 MAMSTRQ6ZN01 415 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 C16orf47Q6ZP98 133 aaPredicted RBP10.08□□□□□ -0.8
COL4A5-201ENST00000328300 ZAR1Q86SH2 424 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 DHRS9Q9BPW9 319 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
COL4A5-201ENST00000328300 FGF2P09038 288 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 SPATA46Q5T0L3 261 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 SLC16A12Q6ZSM3 486 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
COL4A5-201ENST00000328300 OR5AP2Q8NGF4 316 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 VSTM2AQ8TAG5 236 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 C14orf79Q96F83 325 aa10.08□□□□□ -0.8
COL4A5-201ENST00000328300 LYZL6O75951 148 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 C20orf196Q8IYI0 205 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 OR10V1Q8NGI7 309 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 TXN2Q99757 166 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 PRSS27Q9BQR3 290 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 ANKRD12Q6UB98 2062 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 RFPL4AA6NLU0 287 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 RFPL4AL1F8VTS6 287 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 M0QZ24 198 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 IGHMP01871 453 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 CTSDP07339 412 aaPredicted RBP10.07□□□□□ -0.8
COL4A5-201ENST00000328300 KIAA0141Q14154 515 aaPredicted RBP10.07□□□□□ -0.8
COL4A5-201ENST00000328300 TMEM217Q8N7C4 229 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 ZNF439Q8NDP4 499 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 OR10Z1Q8NGY1 313 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 OCEL1Q9H607 264 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 RNF7Q9UBF6 113 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 IGKV1D-16P01601 117 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 ADRB1P08588 477 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 COX6A1P12074 109 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 GNB2P62879 340 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 PDZK1IP1Q13113 114 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 ZNF468Q5VIY5 522 aaPredicted RBP10.07□□□□□ -0.8
COL4A5-201ENST00000328300 BTNL3Q6UXE8 466 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 HGDQ93099 445 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 OOEPA6NGQ2 149 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A27PA6NNH2 459 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 BCL2L11O43521 198 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 GZMHP20718 246 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 RPS4Y2Q8TD47 263 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 HPSE2Q8WWQ2 592 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 ZNF638Q14966 1978 aaKnown RBP10.07□□□□□ -0.8
COL4A5-201ENST00000328300 C20orf202A1L168 122 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A18PA6NE21 464 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A16PA6NEW6 464 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A20PA6NIJ5 464 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A8PA6NJQ4 464 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 DHRS7CA6NNS2 312 aa10.07□□□□□ -0.8
COL4A5-201ENST00000328300 FAM90A22PA8MWA6 464 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms