RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 A6NLC8 198 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 CDIPTO14735 213 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 CTAG2O75638 210 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 RHBDL1O75783 438 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 HTR3BO95264 441 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 CSTBP04080 98 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 SFTPBP07988 381 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ACAA1P09110 424 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 PGA5P0DJD9 388 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 BCL3P20749 454 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF45Q02386 682 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 TLE4Q04727 773 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF846Q147U1 533 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 TESK1Q15569 626 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 MPPED2Q15777 294 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ELP2Q6IA86 826 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 C11orf71Q6IPW1 123 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 BAIAP2L2Q6UXY1 529 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 MRPS24Q96EL2 167 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 S100A16Q96FQ6 103 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 TM2D1Q9BX74 207 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 LPAR5Q9H1C0 372 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 BANF2Q9H503 90 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 USP9YO00507 2555 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 METTL21EPA6NDL7 271 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 NOS1APO75052 506 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 SCGNO76038 276 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 DANCRP0C864 163 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 GTF2F2P13984 249 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 NPBWR2P48146 333 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 SPRNQ5BIV9 151 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 WDR82Q6UXN9 313 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 Q8IYB0 196 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 OSR2Q8N2R0 312 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 POC1AQ8NBT0 407 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 OR10Z1Q8NGY1 313 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ERGIC1Q969X5 290 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 Q96M66 194 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 SOSTQ9BQB4 213 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 NRIP2Q9BQI9 281 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 URM1Q9BTM9 101 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ATG5Q9H1Y0 275 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 UBTD1Q9HAC8 227 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 UFSP2Q9NUQ7 469 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 C1orf123Q9NWV4 160 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 RABL2BQ9UNT1 228 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 A0A0A6YYH2 397 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 FABP12A6NFH5 140 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 A6NJ64 397 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 CDK2P24941 298 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 PTBP1P26599 531 aaKnown RBP eCLIP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 NR4A2P43354 598 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 FGF12P61328 243 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 ERVK11-1P61568 191 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 NHLRC3Q5JS37 347 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 SP5Q6BEB4 398 aaPredicted RBP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM131AQ6UXB0 335 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 MOGAT3Q86VF5 341 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF488Q96MN9 340 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 TRAF4Q9BUZ4 470 aaPredicted RBP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 SELENOIQ9C0D9 397 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 EGLN1Q9GZT9 426 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 RBFOX1Q9NWB1 397 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 CACNA1DQ01668 2161 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 COL12A1Q99715 3063 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 AKR7A2O43488 359 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 TPPPO94811 219 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 TNFRSF1AP19438 455 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 CPT2P23786 658 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 CFHR2P36980 270 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 MNDAP41218 407 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 RBM11P57052 281 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 RAB12Q6IQ22 244 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF826PQ6ZT77 177 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM89BQ8N5H3 189 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 Q8TCH9 128 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 PHF21AQ96BD5 680 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 POM121Q96HA1 1249 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 NUDT16L1Q9BRJ7 211 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 NICN1Q9BSH3 213 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 DIABLOQ9NR28 239 aa8.66□□□□□ -1.02
VIPAS39-201ENST00000327028 TANC2Q9HCD6 1990 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 A0A0A6YYD4 124 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 hCG_1807616A0A1W2PRN6 198 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 F8VVB4 439 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 F8VWA3 439 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 XRCC3O43542 346 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 CD8AP01732 235 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 SOD3P08294 240 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 PITPNBP48739 271 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 CCL8P80075 99 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 IL18Q14116 193 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF79Q15937 498 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 TMEM69Q5SWH9 247 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 ZCCHC24Q8N2G6 241 aaKnown RBP8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 OR56B1Q8NGI3 324 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 OR51T1Q8NGJ9 327 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 EMG1Q92979 244 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms