RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SMIM14Q96QK8 99 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 ALKBH7Q9BT30 221 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CHST6Q9GZX3 395 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 MRPS18AQ9NVS2 196 aaKnown RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PRSS50Q9UI38 385 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 ATRAIDQ6UW56 229 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 OR2A5Q96R48 311 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 FAM173AQ9BQD7 235 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PBOV1Q9GZY1 135 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 WNT5BQ9H1J7 359 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 GPR84Q9NQS5 396 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 A0A1W2PR48 441 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 PRSS38A1L453 326 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR2A4O95047 310 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 SEC11BP0C7V7 166 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 VIPR2P41587 438 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 HHEXQ03014 270 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 PRTGQ2VWP7 1150 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 DNLZQ5SXM8 178 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 FBXO46Q6PJ61 603 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR2A7Q96R45 310 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 VAX2Q9UIW0 290 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 PGA4P0DJD7 388 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 PGA5P0DJD9 388 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 DYNLT3P51808 116 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 COX19Q49B96 90 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF468Q5VIY5 522 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 RNASEKQ6P5S7 137 aaKnown RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF813Q6ZN06 617 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 TAS1R1Q7RTX1 841 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 PRR22Q8IZ63 422 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR6X1Q8NH79 312 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 DIO2Q92813 273 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ERGIC1Q969X5 290 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 TP53RKQ96S44 253 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 MAP1LC3CQ9BXW4 147 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 M0R2Z0 102 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 DEDDO75618 318 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 HOXB2P14652 356 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 HIST1H1DP16402 221 aaKnown RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 CLLU1OSQ5K130 101 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 MORN1Q5T089 497 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 FAM69BQ5VUD6 431 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 RBMXL3Q8N7X1 1067 aaKnown RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 CHST11Q9NPF2 352 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 LRP12Q9Y561 859 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 FKBP2P26885 142 aaKnown RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 AGFG1P52594 562 aaKnown RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ERVS71-1P61550 626 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 SHHQ15465 462 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 C17orf78Q8N4C9 275 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR2C3Q8N628 320 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ZNRF4Q8WWF5 429 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 DPF1Q92782 380 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 MS4A6EQ96DS6 147 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 TBX15Q96SF7 602 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 TRAPPC2LQ9UL33 140 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 H0YGG7 62 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OGG1O15527 345 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 CYC1P08574 325 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 LRRC3BQ96PB8 259 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 SLC46A2Q9BY10 475 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 FOXJ2Q9P0K8 574 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 TRGC2P03986 189 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 IL2RGP31785 369 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 KIAA0895LQ68EN5 471 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR5B3Q8NH48 314 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR52N5Q8NH56 324 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 RIMS4Q9H426 269 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 RALYQ9UKM9 306 aaKnown RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 KLF2Q9Y5W3 355 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 C11orf94C9JXX5 98 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 GALR3O60755 368 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 GLRA1P23415 457 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 GLIPR1P48060 266 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 H1FOOQ8IZA3 346 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-201ENST00000322213 OR4D9Q8NGE8 314 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ADAMTS17Q8TE56 1095 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 PP6455Q8WZ26 134 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 SLAMF6Q96DU3 332 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 VN1R1Q9GZP7 353 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 MAGT1Q9H0U3 335 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF17P17021 662 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 C16orf82Q7Z2V1 217 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 IFI44Q8TCB0 444 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 AQP10Q96PS8 301 aa6.32□□□□□ -1.4
SMC1A-201ENST00000322213 IRF2P14316 349 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 C17orf67Q0P5P2 114 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 KIAA0040Q15053 153 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 HNRNPA1L2Q32P51 320 aaKnown RBP6.31□□□□□ -1.4
SMC1A-201ENST00000322213 LANCL3Q6ZV70 420 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 MRPL52Q86TS9 123 aaKnown RBP6.31□□□□□ -1.4
SMC1A-201ENST00000322213 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 SGIP1Q9BQI5 828 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 DEFB126Q9BYW3 111 aa6.31□□□□□ -1.4
SMC1A-201ENST00000322213 MYOZ1Q9NP98 299 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms