RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 MGMTP16455 207 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 UNC119Q13432 240 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 LSAMPQ13449 338 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 SPANXN2Q5MJ10 180 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 ZNF826PQ6ZT77 177 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 CDH24Q86UP0 819 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 TMEM104Q8NE00 496 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 OR11L1Q8NGX0 322 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 SLC25A38Q96DW6 304 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 WDFY2Q96P53 400 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 GAL3ST1Q99999 423 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 ABCG5Q9H222 651 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 RHOFQ9HBH0 211 aa23.21■■□□□ 1.31
CTDNEP1-201ENST00000318988 NPBWR2P48146 333 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 EFNB2P52799 333 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 C11orf71Q6IPW1 123 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 C20orf204Q6ZNR8 217 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 C11orf53Q8IXP5 236 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 CMTM4Q8IZR5 234 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 BATF2Q8N1L9 274 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 OSR2Q8N2R0 312 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 MRPS24Q96EL2 167 aaKnown RBP23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 SELENOIQ9C0D9 397 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 PPP1R3CQ9UQK1 317 aa23.2■■□□□ 1.3
CTDNEP1-201ENST00000318988 A0A1W2PP11 408 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 SFTPBP07988 381 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 IRF2P14316 349 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 COL8A1P27658 744 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 PLA2G7Q13093 441 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 SPRNQ5BIV9 151 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 WDR82Q6UXN9 313 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 OR51T1Q8NGJ9 327 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 S100ZQ8WXG8 99 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 CACNG6Q9BXT2 260 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 GCM1Q9NP62 436 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 DIABLOQ9NR28 239 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 EXTL2Q9UBQ6 330 aa23.19■■□□□ 1.3
CTDNEP1-201ENST00000318988 NXPH2O95156 264 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 ACAA1P09110 424 aaPredicted RBP23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 PGA5P0DJD9 388 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 ELP2Q6IA86 826 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 CNIH2Q6PI25 160 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 POC1AQ8NBT0 407 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 OR10Z1Q8NGY1 313 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 LRRC29Q8WV35 223 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 HPS1Q92902 700 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 EMG1Q92979 244 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 ZNF488Q96MN9 340 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 PSMG3-AS1Q96PY0 264 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 RBFOX1Q9NWB1 397 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 AKR7A2O43488 359 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 SCGNO76038 276 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 RPS27AP62979 156 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 FIP1L1Q6UN15 594 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 PLEKHF2Q9H8W4 249 aa23.18■■□□□ 1.3
CTDNEP1-201ENST00000318988 PKDREJQ9NTG1 2253 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 LRRC30A6NM36 301 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 NOS1APO75052 506 aaPredicted RBP23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 PRKACAP17612 351 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 CPT2P23786 658 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 PITPNBP48739 271 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 GMFBP60983 142 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 FGF12P61328 243 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 FAM58AQ8N1B3 248 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 C14orf79Q96F83 325 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 NRIP2Q9BQI9 281 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 HMG20AQ9NP66 347 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 RNF7Q9UBF6 113 aa23.17■■□□□ 1.3
CTDNEP1-201ENST00000318988 FABP12A6NFH5 140 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 GLRA1P23415 457 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 CFHR2P36980 270 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 RAB12Q6IQ22 244 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 CCDC190Q86UF4 302 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 Q8NFD4 153 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 OR4M1Q8NGD0 313 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 Q8TCH9 128 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 LPAR5Q9H1C0 372 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 ST3GAL6Q9Y274 331 aa23.16■■□□□ 1.3
CTDNEP1-201ENST00000318988 CHRM2P08172 466 aa23.15■■□□□ 1.3
CTDNEP1-201ENST00000318988 FAM131AQ6UXB0 335 aa23.15■■□□□ 1.3
CTDNEP1-201ENST00000318988 BOLLQ8N9W6 283 aaKnown RBP23.15■■□□□ 1.3
CTDNEP1-201ENST00000318988 OR56B1Q8NGI3 324 aa23.15■■□□□ 1.3
CTDNEP1-201ENST00000318988 NEU4Q8WWR8 484 aaPredicted RBP23.15■■□□□ 1.3
CTDNEP1-201ENST00000318988 A0A0A6YYH2 397 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 A6NJ64 397 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 F8VVB4 439 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 F8VWA3 439 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 IFNL4K9M1U5 179 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 CDK2P24941 298 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 PMELP40967 661 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 VEGFCP49767 419 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 SNU13P55769 128 aaKnown RBP23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 RBM11P57052 281 aaKnown RBP23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 TMEM69Q5SWH9 247 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 BAIAP2L2Q6UXY1 529 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 ZNF295-AS1Q8N0V1 137 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 DTX3Q8N9I9 347 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 Q96M66 194 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 TM2D1Q9BX74 207 aa23.14■■□□□ 1.3
CTDNEP1-201ENST00000318988 RASL12Q9NYN1 266 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms