RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 A6NLC8 198 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF726A6NNF4 738 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF716A6NP11 495 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 XRCC3O43542 346 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 CXCL13O43927 109 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 FBXO24O75426 580 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 HCKP08631 526 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 EIF1AXP47813 144 aaKnown RBP11.43□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF133P52736 654 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-201ENST00000317677 RAC3P60763 192 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 RASGEF1BQ0VAM2 473 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 PCGF3Q3KNV8 242 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 NCMAPQ5T1S8 102 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 STAC2Q6ZMT1 411 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 GALNT16Q8N428 558 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-201ENST00000317677 SLAMF6Q96DU3 332 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 FER1L6-AS2Q96M78 137 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 S100A13Q99584 98 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 CHST6Q9GZX3 395 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 EXO5Q9H790 373 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 RPS10P5Q9NQ39 176 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 C19orf12Q9NSK7 152 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 OR5V1Q9UGF6 321 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 BOKQ9UMX3 212 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-201ENST00000317677 R4GMQ9 66 aa11.43□□□□□ -0.58
CPNE1-201ENST00000317677 DMXL2Q8TDJ6 3036 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 C7orf77A4D0Y5 90 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 SEC14L6B5MCN3 397 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 RPL36A-HNRNPH2H7BZ11 118 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 NKX2-8O15522 239 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 RRP8O43159 456 aaKnown RBP11.42□□□□□ -0.58
CPNE1-201ENST00000317677 VAMP5O95183 116 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 HPNP05981 417 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 SLC6A9P48067 706 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 DVL1P1P54792 670 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-201ENST00000317677 HNF4GQ14541 408 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 PPA1Q15181 289 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 KCNMB1Q16558 191 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 CLEC1AQ8NC01 280 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 OR10D3Q8NH80 312 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 GPR148Q8TDV2 347 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 ROBO4Q8WZ75 1007 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 S100PBPQ96BU1 408 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 TTTY12Q9BZ98 90 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 COMMD4Q9H0A8 199 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 PNRC2Q9NPJ4 139 aaKnown RBP11.42□□□□□ -0.58
CPNE1-201ENST00000317677 FOXD3Q9UJU5 478 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-201ENST00000317677 GDF2Q9UK05 429 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-201ENST00000317677 EMC9Q9Y3B6 208 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 FAM96BQ9Y3D0 163 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 V9GY05 133 aa11.42□□□□□ -0.58
CPNE1-201ENST00000317677 GJE1A6NN92 205 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 DNPH1O43598 174 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 GSK3AP49840 483 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 EIF5AP63241 154 aaKnown RBP11.41□□□□□ -0.58
CPNE1-201ENST00000317677 ABLIM2Q6H8Q1 611 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 FOXL2NBQ6ZUU3 175 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 OR51S1Q8NGJ8 323 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 OR10R2Q8NGX6 335 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 OR2V1Q8NHB1 315 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 PPP1R1CQ8WVI7 109 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 TMEM106AQ96A25 262 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF837Q96EG3 531 aaPredicted RBP11.41□□□□□ -0.58
CPNE1-201ENST00000317677 ZNF845Q96IR2 970 aaPredicted RBP11.41□□□□□ -0.58
CPNE1-201ENST00000317677 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 POFUT1Q9H488 388 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 BCO1Q9HAY6 547 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 GTF2A1LQ9UNN4 478 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 FLVCR1Q9Y5Y0 555 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 CXorf65A6NEN9 183 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 MARCH11A6NNE9 402 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 FAM166BA8MTA8 275 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 NPIPA2E9PIF3 369 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 NPIPA3F8WFD2 350 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 LMX1BO60663 402 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 SP1P08047 785 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 LIPCP11150 499 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 MAGEA5P43359 124 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 CSNK1A1P48729 337 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 CARD18P57730 90 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 LSM6P62312 80 aaKnown RBP11.41□□□□□ -0.58
CPNE1-201ENST00000317677 RAB1AP62820 205 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 C10orf128Q5T292 105 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 AWAT2Q6E213 333 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 ADAM5Q6NVV9 412 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 DHRS11Q6UWP2 260 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 PLXDC2Q6UX71 529 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 GALNTL5Q7Z4T8 443 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 TMEM251Q8N6I4 163 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 NABP1Q96AH0 204 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 KIRREL1Q96J84 757 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 SPOCK3Q9BQ16 436 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 FAM206AQ9NX38 181 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 ABI3Q9P2A4 366 aa11.41□□□□□ -0.58
CPNE1-201ENST00000317677 TMED3Q9Y3Q3 217 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms