RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SCN8AQ9UQD0 1980 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 IGKV3D-11A0A0A0MRZ8 115 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 A0A0U1RQV5 110 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1B0GWJ7 208 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TGFBR3LH3BV60 316 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 H7BYZ3 331 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ETV2O00321 342 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 C1QL1O75973 258 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TRGC1P0CF51 173 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 MSR1P21757 451 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 FAM3BP58499 235 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 C17orf67Q0P5P2 114 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM252Q8N6L7 170 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 BOD1Q96IK1 185 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 FOXN4Q96NZ1 517 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PYGO2Q9BRQ0 406 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 MRPL13Q9BYD1 178 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 MTIF3Q9H2K0 278 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF391Q9UJN7 358 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SLCO1B1Q9Y6L6 691 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ANKUB1A6NFN9 424 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 FOXI3A8MTJ6 420 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 MSTNO14793 375 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TRGC2P03986 189 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 HPNP05981 417 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 CTXN2P0C2S0 81 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 CTSEP14091 401 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF43P17038 809 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 CNN3Q15417 329 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 HAGHQ16775 308 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SLC37A2Q8TED4 501 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 MRGPRX4Q96LA9 322 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 HIST1H2BLQ99880 126 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PARP12Q9H0J9 701 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SLC2A9Q9NRM0 540 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PNO1Q9NRX1 252 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 P4HTMQ9NXG6 502 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ZDHHC8Q9ULC8 765 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 LILRA5A6NI73 299 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 C9J4A7 227 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM250H0YL14 139 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TSPAN2O60636 221 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 DHRS3O75911 302 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TK1P04183 234 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 METTL15P1P0C7V9 234 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 BCL2P10415 239 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CAPZBP47756 277 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM156Q8N614 296 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SSC4DQ8WTU2 575 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TSACCQ96A04 125 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SHDQ96IW2 340 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CISD1Q9NZ45 108 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 PLA2G2EQ9NZK7 142 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 PLXNA4Q9HCM2 1894 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LY86O95711 162 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM225BP0DP42 221 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 NUTF2P61970 127 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ACY1Q03154 408 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FMODQ06828 376 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 DEFB110Q30KQ9 67 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF761Q86XN6 746 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 GJC3Q8NFK1 279 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CCL4L1Q8NHW4 92 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ADIPOR1Q96A54 375 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MOB3AQ96BX8 217 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 IMMP2LQ96T52 175 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CDCA3Q99618 268 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 NKX3-1Q99801 234 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 PSMG3Q9BT73 122 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM60AQ9NP50 221 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 PLSCR2Q9NRY7 297 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ALPK3Q96L96 1907 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 KIR2DS1A0A191URI9 304 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1B0GU03 582 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 HOXB2P14652 356 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 HOXA6P31267 233 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 KIR2DS4P43632 304 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 BIDP55957 195 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SERF2P84101 59 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 KIR2DS1Q14954 304 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TGIF1Q15583 401 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MRGPRGQ86SM5 289 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SLC35G3Q8N808 338 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 STARD5Q9NSY2 213 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 PLXNA2O75051 1894 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LOC102723971A0A1B0GUV8 181 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1W2PNV4 684 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A10PA6NDY2 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A18PA6NE21 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A16PA6NEW6 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A20PA6NIJ5 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A8PA6NJQ4 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A7PA6NKC0 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 IFITM10A6NMD0 228 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A22PA8MWA6 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A12PA8MX19 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A5PA8MXJ8 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A23PA8MXZ1 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 H0YL77 283 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms