RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 DUS3LQ96G46 650 aaKnown RBP11.93□□□□□ -0.5
RFFL-201ENST00000315249 RSRP1Q9BUV0 290 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 UBE2KP61086 200 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 CSAG2Q9Y5P2 127 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 CDC42EP2O14613 210 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 PPT1P50897 306 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 SMAD7O15105 426 aaKnown RBP11.93□□□□□ -0.5
RFFL-201ENST00000315249 TGFBR1P36897 503 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 MAMSTRQ6ZN01 415 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 ATG4DQ86TL0 474 aaPredicted RBP11.93□□□□□ -0.5
RFFL-201ENST00000315249 ZNF436Q9C0F3 470 aaPredicted RBP11.93□□□□□ -0.5
RFFL-201ENST00000315249 ICAM5Q9UMF0 924 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 OR5B21A6NL26 309 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 HRASP01112 189 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 GPR6P46095 362 aaPredicted RBP11.93□□□□□ -0.5
RFFL-201ENST00000315249 NAAAQ02083 359 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 INO80CQ6PI98 192 aaPredicted RBP11.93□□□□□ -0.5
RFFL-201ENST00000315249 NHLRC1Q6VVB1 395 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 ZFP82Q8N141 532 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 ARHGEF39Q8N4T4 335 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 GPX8Q8TED1 209 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 TIMM9Q9Y5J7 89 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 KCNMB2Q9Y691 235 aa11.93□□□□□ -0.5
RFFL-201ENST00000315249 MGAMO43451 1857 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 A0A1B0GUH1 482 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 SERPINE3A8MV23 424 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 TOX4O94842 621 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 FUCA1P04066 466 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ADRA2CP18825 462 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 RAB5BP61020 215 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ACSM6Q6P461 480 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 DBX2Q6ZNG2 339 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 OR4S1Q8NGB4 309 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 OR13C8Q8NGS7 320 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 HS3ST3B1Q9Y662 390 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 PPP3CBP16298 524 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ADAMTS17Q8TE56 1095 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 SOX7Q9BT81 388 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ZNF320A2RRD8 509 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 H0Y8G0 127 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 H3BP45 60 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ZNF17P17021 662 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 UBE2MP61081 183 aaKnown RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 HIST2H3PS2Q5TEC6 136 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 MRGPRGQ86SM5 289 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 PLAC1Q9HBJ0 212 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 CISD1Q9NZ45 108 aaKnown RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 ZNF835Q9Y2P0 537 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 MAGEB1P43366 347 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 TMEM182Q6ZP80 229 aaPredicted RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 ZNF767PQ75MW2 155 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 TMEM56Q96MV1 263 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 TAF9BQ9HBM6 251 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 GNG13Q9P2W3 67 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 RNF7Q9UBF6 113 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 GREM1O60565 184 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 HOXD4P09016 255 aaPredicted RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 OR4A8P0C604 315 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 EPXP11678 715 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 SLC25A6P12236 298 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 OR3A1P47881 315 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 GP2P55259 537 aaKnown RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 NDUFA6P56556 154 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 FAM181AQ8N9Y4 354 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 OR2D2Q9H210 308 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ACP1P24666 158 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ACKR3P25106 362 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 BPIFB3P59826 476 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 MED30Q96HR3 178 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 ZNF385AQ96PM9 386 aaKnown RBP11.92□□□□□ -0.5
RFFL-201ENST00000315249 SIRT5Q9NXA8 310 aa11.92□□□□□ -0.5
RFFL-201ENST00000315249 IGKV1-8A0A0C4DH67 115 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 MSRB3Q8IXL7 192 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 OR2J1Q9GZK6 312 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 TIAF1O95411 115 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 TSPO2Q5TGU0 170 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 FAM214BQ7L5A3 538 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 RTN4IP1Q8WWV3 396 aaPredicted RBP11.91□□□□□ -0.5
RFFL-201ENST00000315249 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 IGKV3-7A0A075B6H7 116 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 SERTM2A0A1B0GWG4 89 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 CST2P09228 141 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 CTSSP25774 331 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 LGALS7P47929 136 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 ATP5J2P56134 94 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 CDK5Q00535 292 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 PLPPR5Q32ZL2 321 aa11.91□□□□□ -0.5
RFFL-201ENST00000315249 CELF2-AS1Q8N7Q2 184 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms