RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ADAT1Q9BUB4 502 aaKnown RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 TM2D1Q9BX74 207 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 CST11Q9H112 138 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 METTL9Q9H1A3 318 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 ELL3Q9HB65 397 aaPredicted RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 IL36GQ9NZH8 169 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 COQ3Q9NZJ6 369 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 ZNF581Q9P0T4 197 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 KLK11Q9UBX7 282 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 RBMX2Q9Y388 322 aaKnown RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 CADP27708 2225 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 HCFC1P51610 2035 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 TMEM235A6NFC5 223 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 OR5B21A6NL26 309 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 C3orf80F5H4A9 247 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 SYNGR1O43759 233 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 TIMM8AO60220 97 aaPredicted RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 HTR3BO95264 441 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 PTTG1O95997 202 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 ZNF250P15622 560 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 PPP3CBP16298 524 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 PTAFRP25105 342 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 GCH1P30793 250 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 GLRXP35754 106 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 GDNFP39905 211 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 RANBP1P43487 201 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 NPBWR2P48146 333 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 DEFA1P59665 94 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 DEFA3P59666 94 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 TLE1Q04724 770 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 DAZAP2Q15038 168 aaPredicted RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 RSU1Q15404 277 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 C11orf91Q3C1V1 193 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 PLAC9Q5JTB6 97 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 OLFML2AQ68BL7 652 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 ZNF57Q68EA5 555 aaPredicted RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 VHLLQ6RSH7 139 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 TMEM108Q6UXF1 575 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 C1orf174Q8IYL3 243 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 FAM89BQ8N5H3 189 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 C19orf18Q8NEA5 215 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 OR10AD1Q8NGE0 317 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 OR51T1Q8NGJ9 327 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 OR51F2Q8NH61 342 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 TMEM171Q8WVE6 324 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 AQP3Q92482 292 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 GTF3AQ92664 365 aaKnown RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 RNASE6Q93091 150 aaKnown RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 SLAMF9Q96A28 289 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 HS3ST6Q96QI5 342 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 HIST1H2AAQ96QV6 131 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 NUDT16L1Q9BRJ7 211 aaKnown RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 SELENOIQ9C0D9 397 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 OR51I2Q9H344 312 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 ERRFI1Q9UJM3 462 aaPredicted RBP5.93□□□□□ -1.46
PTCD2-201ENST00000308077 KCNK7Q9Y2U2 307 aa5.93□□□□□ -1.46
PTCD2-201ENST00000308077 PDZD2O15018 2839 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 A0A1B0GWJ7 208 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 MEIS3P1A6NDR6 274 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 F8VVB4 439 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 F8VWA3 439 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 ABCD4O14678 606 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 LYRM1O43325 122 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 GNB3P16520 340 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 BCL3P20749 454 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 PRSS3P35030 304 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 BTCP35070 178 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 GNG3P63215 75 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 MRPS10P82664 201 aaKnown RBP5.92□□□□□ -1.46
PTCD2-201ENST00000308077 TFF3Q07654 80 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 KLF9Q13886 244 aaPredicted RBP5.92□□□□□ -1.46
PTCD2-201ENST00000308077 GPR176Q14439 515 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 OR8G1Q15617 311 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 PIGYQ3MUY2 71 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 CDNFQ49AH0 187 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 FAM76BQ5HYJ3 339 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 ZNF787Q6DD87 383 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 SIGIRRQ6IA17 410 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 RAB12Q6IQ22 244 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 HAGHLQ6PII5 290 aaPredicted RBP5.92□□□□□ -1.46
PTCD2-201ENST00000308077 Q6ZTK2 550 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 ZSCAN4Q8NAM6 433 aaPredicted RBP5.92□□□□□ -1.46
PTCD2-201ENST00000308077 MINDY2Q8NBR6 621 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 CHST4Q8NCG5 386 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 GALNT11Q8NCW6 608 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 Q8NFD4 153 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 OR8S1Q8NH09 359 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 LINC01560Q8TB33 94 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 GPX8Q8TED1 209 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 C15orf40Q8WUR7 153 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 FCAMRQ8WWV6 532 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 SEH1LQ96EE3 360 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 SYT3Q9BQG1 590 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 URM1Q9BTM9 101 aaKnown RBP5.92□□□□□ -1.46
PTCD2-201ENST00000308077 RTL8AQ9BWD3 113 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 MMP28Q9H239 520 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 MSL2Q9HCI7 577 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 MTCH1Q9NZJ7 389 aa5.92□□□□□ -1.46
PTCD2-201ENST00000308077 IGLV3-9A0A075B6K5 115 aa5.91□□□□□ -1.46
PTCD2-201ENST00000308077 IGHV3-64DA0A0J9YX35 117 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms