RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GSK3AP49840 483 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 TGFBR3Q03167 851 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 ROM1Q03395 351 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 EGR4Q05215 589 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 CATR1Q13166 79 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 MRPL24Q96A35 216 aaKnown RBP11.75□□□□□ -0.53
DDX54-201ENST00000306014 hCG_1809904A0A1W2PP81 198 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 A0A1W2PPH5 198 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 A0A1W2PR64 198 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 A0A1W2PRV1 198 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 DEGS1O15121 323 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 GALNSP34059 522 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 ZNF260Q3ZCT1 412 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 ZNF774Q6NX45 483 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 COMMD1Q8N668 190 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 SLC35B3Q9H1N7 401 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 OR5AC2Q9NZP5 309 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 IGLV1-36A0A0B4J1U3 117 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 FUT3P21217 361 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 SLC36A1Q7Z2H8 476 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 OR1F12Q8NHA8 337 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 EXTL1Q92935 676 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 ANXA10Q9UJ72 324 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 GPR37O15354 613 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 EFEMP2O95967 443 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 SCGB1D1O95968 90 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 IGHV4-34P06331 123 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 CTXN2P0C2S0 81 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 FAM157BP0CG42 384 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 FSTP19883 344 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 FCARP24071 287 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 PTX4Q96A99 478 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 CABLES2Q9BTV7 478 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 ADAM19Q9H013 955 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 RAB33BQ9H082 229 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 TOLLIPQ9H0E2 274 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 C12orf49Q9H741 205 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
DDX54-201ENST00000306014 PSMB3P49720 205 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 FZD5Q13467 585 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 ZNF787Q6DD87 383 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 LHX4Q969G2 390 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
DDX54-201ENST00000306014 TLNRD1Q9H1K6 362 aa11.74□□□□□ -0.53
DDX54-201ENST00000306014 GAR1Q9NY12 217 aaKnown RBP11.74□□□□□ -0.53
DDX54-201ENST00000306014 TIMM8BQ9Y5J9 83 aaPredicted RBP11.74□□□□□ -0.53
DDX54-201ENST00000306014 SVILO95425 2214 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 MED12Q93074 2177 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 C7orf77A4D0Y5 90 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 FAM166BA8MTA8 275 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 SCAF4O95104 1147 aaKnown RBP11.73□□□□□ -0.53
DDX54-201ENST00000306014 SELENOVP59797 346 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 RAB31Q13636 194 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 CNEP1R1Q8N9A8 125 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 OR5C1Q8NGR4 320 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 HPSE2Q8WWQ2 592 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 CCDC74BQ96LY2 380 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 IGHV1OR15-9A0A0B4J2B8 117 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 ZNF816-ZNF321PA0A0X1KG74 233 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 H7BYZ3 331 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 FUT6P51993 359 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 DCAF12Q5T6F0 453 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 OR6X1Q8NH79 312 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 NRIP2Q9BQI9 281 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 NPTNQ9Y639 398 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 PPP5D1E7EU14 171 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
DDX54-201ENST00000306014 MPGP29372 298 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 NPBWR1P48145 328 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 ARG2P78540 354 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 DRAM2Q6UX65 266 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 ZNF429Q86V71 674 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 OR2C3Q8N628 320 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 FOXB1Q99853 325 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
DDX54-201ENST00000306014 OR6C6A6NF89 314 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
DDX54-201ENST00000306014 GRPP07492 148 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 ATRAIDQ6UW56 229 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 C15orf54Q8N8G6 183 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 DMBX1Q8NFW5 382 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 APH1AQ96BI3 265 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 UTP23Q9BRU9 249 aaKnown RBP11.72□□□□□ -0.53
DDX54-201ENST00000306014 HDHD3Q9BSH5 251 aaPredicted RBP11.72□□□□□ -0.53
DDX54-201ENST00000306014 WDR13Q9H1Z4 485 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 KCNMB2Q9Y691 235 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 ZNF32P17041 273 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 GCH1P30793 250 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 SSX2Q16385 188 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms