RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 EEF1E1-BLOC1S5C9J1V9 151 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 HCRTR2O43614 444 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 C1QL1O75973 258 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 IGKV1D-12P01611 117 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 CTSDP07339 412 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H1BP16401 226 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 PI3P19957 117 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 EIF2S3P41091 472 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 B3GALT5-AS1P59052 145 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 CYCSP99999 105 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 TRA2AQ13595 282 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS50-202ENST00000305866 PMS2P11Q13670 270 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 PCOLCEQ15113 449 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 TMEM176BQ3YBM2 270 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 LINC00346Q8IVM7 164 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 ZNF101Q8IZC7 436 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 COMMD1Q8N668 190 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 RNASEH2CQ8TDP1 164 aaKnown RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 FAM46BQ96A09 425 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 DACT3Q96B18 629 aaPredicted RBP4.72□□□□□ -1.65
VPS50-202ENST00000305866 SLAMF6Q96DU3 332 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 CMKLR1Q99788 373 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 MICU1Q9BPX6 476 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 IGFLR1Q9H665 355 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 CALHM2Q9HA72 323 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 PRDM6Q9NQX0 595 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 SDHAF3Q9NRP4 125 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 PPP4R1LQ9P1A2 415 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 MLXQ9UH92 298 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 SHANK1Q9Y566 2161 aa4.72□□□□□ -1.65
VPS50-202ENST00000305866 NR2C1P13056 603 aa4.71□□□□□ -1.65
VPS50-202ENST00000305866 CBR1P16152 277 aa4.71□□□□□ -1.65
VPS50-202ENST00000305866 CD80P33681 288 aa4.71□□□□□ -1.65
VPS50-202ENST00000305866 NOVA1P51513 510 aaKnown RBP4.71□□□□□ -1.65
VPS50-202ENST00000305866 RNASE10Q5GAN6 216 aaKnown RBP4.71□□□□□ -1.65
VPS50-202ENST00000305866 C20orf196Q8IYI0 205 aa4.71□□□□□ -1.65
VPS50-202ENST00000305866 PP6455Q8WZ26 134 aa4.71□□□□□ -1.65
VPS50-202ENST00000305866 NXT1Q9UKK6 140 aaKnown RBP4.71□□□□□ -1.65
VPS50-202ENST00000305866 KPTNQ9Y664 436 aa4.71□□□□□ -1.65
VPS50-202ENST00000305866 ESPL1Q14674 2120 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 TRAV1-1A0A0B4J248 108 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 METTL21EPA6NDL7 271 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A18PA6NE21 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A16PA6NEW6 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A20PA6NIJ5 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 C19orf67A6NJJ6 358 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A8PA6NJQ4 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 SERPINE3A8MV23 424 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A5PA8MXJ8 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 ATXN7O15265 892 aaPredicted RBP4.71□□□□□ -1.66
VPS50-202ENST00000305866 HTR3BO95264 441 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A15PP0C7V4 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A13PP0C7W8 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A14PP0C7W9 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 FAM90A24PP0C7X0 464 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 DTYMKP23919 212 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 IL11RAQ14626 422 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 SCGB2B2Q4G0G5 96 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 MIDNQ504T8 468 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 GGNBP1Q5YKI7 109 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 CLEC9AQ6UXN8 241 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 Q6ZRG5 221 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 KCNG3Q8TAE7 436 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 LMX1AQ8TE12 382 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 TMEM45BQ96B21 275 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 ABHD14BQ96IU4 210 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 ADGRG7Q96K78 797 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 TECTBQ96PL2 329 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 SPRY4Q9C004 299 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 HRH4Q9H3N8 390 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 PLSCR2Q9NRY7 297 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 MYOTQ9UBF9 498 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 EDARQ9UNE0 448 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 TMED3Q9Y3Q3 217 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 WDR87Q6ZQQ6 2873 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 IGSF23A1L1A6 192 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 OR6C6A6NF89 314 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 VAMP5O95183 116 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 ARG1P05089 322 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 AKR1C4P17516 323 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 CPT2P23786 658 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 S100PP25815 95 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 OR8B8Q15620 311 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 GUK1Q16774 197 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 CCDC157Q569K6 752 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 NMSQ5H8A3 153 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 CPEB2Q7Z5Q1 589 aaKnown RBP4.71□□□□□ -1.66
VPS50-202ENST00000305866 SAP25Q8TEE9 199 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 TSEN15Q8WW01 171 aaKnown RBP4.71□□□□□ -1.66
VPS50-202ENST00000305866 PRRX2Q99811 253 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 HDHD3Q9BSH5 251 aaPredicted RBP4.71□□□□□ -1.66
VPS50-202ENST00000305866 DUSP23Q9BVJ7 150 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 CAPN10Q9HC96 672 aa4.71□□□□□ -1.66
VPS50-202ENST00000305866 PNO1Q9NRX1 252 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms