RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ZNF611Q8N823 705 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 C9orf106Q8NAJ2 232 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 OR10AD1Q8NGE0 317 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 TECTBQ96PL2 329 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 HS3ST6Q96QI5 342 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PRRX2Q99811 253 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SULT4A1Q9BR01 284 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PAPOLGQ9BWT3 736 aaKnown RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 AK3Q9UIJ7 227 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PTPRZ1P23471 2315 aaPredicted RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 C9orf170A2RU37 121 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 K7EM74 188 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SLC22A5O76082 557 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 MPC2O95563 127 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CST4P01036 141 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 HLA-AP01891 365 aaKnown RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 ZNF14P17017 642 aaPredicted RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 CXCL2P19875 107 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 AMY2BP19961 511 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 NPY4RP50391 375 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PER3P56645 1201 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 TSPAN5P62079 268 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PLP2Q04941 152 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 FOXF2Q12947 444 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 PDCD1Q15116 288 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 MPPED2Q15777 294 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 Q6ZPA2 131 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SLC25A26Q70HW3 274 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 OVCH2Q7RTZ1 564 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 MRPL21Q7Z2W9 205 aaKnown RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 LYG2Q86SG7 212 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 LHFPL1Q86WI0 220 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 OSR2Q8N2R0 312 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 ARRDC1Q8N5I2 433 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SLC30A7Q8NEW0 376 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 OR5H2Q8NGV7 314 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 DYRK2Q92630 601 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CPNE2Q96FN4 548 aaPredicted RBP5.63□□□□□ -1.51
USP47-201ENST00000305481 OR51B6Q9H340 312 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 C5orf66Q9H5L9 145 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 GLRX2Q9NS18 164 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 DKK4Q9UBT3 224 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 ITGB1BP2Q9UKP3 347 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 HSF4Q9ULV5 492 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 SPTBN2O15020 2390 aa5.63□□□□□ -1.51
USP47-201ENST00000305481 CD300LBA8K4G0 201 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 F5H5P2 479 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 LYZL6O75951 148 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 AKR1C4P17516 323 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ZNF81P51508 661 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 GPM6AP51674 278 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 MALLQ13021 153 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 TSC22D1Q15714 1073 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 CEACAM21Q3KPI0 293 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ACTBL2Q562R1 376 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 VWA1Q6PCB0 445 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 IGFL3Q6UXB1 125 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ZSCAN4Q8NAM6 433 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 BHLHE23Q8NDY6 225 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 CSNK2A3Q8NEV1 391 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 Q8NFD4 153 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 OR5AP2Q8NGF4 316 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 TMEM230Q96A57 120 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 RTBDNQ9BSG5 229 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 COL25A1Q9BXS0 654 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 GPR132Q9UNW8 380 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ST3GAL6Q9Y274 331 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ANKRD11Q6UB99 2663 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 CUL9Q8IWT3 2517 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 PI3P19957 117 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 SPINK2P20155 84 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 APLNRP35414 380 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 RBM11P57052 281 aaKnown RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 BAMBIQ13145 260 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ZNF169Q14929 603 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 PPA1Q15181 289 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 IGFBP7Q16270 282 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 LIN54Q6MZP7 749 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 TEX261Q6UWH6 196 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 DPPA2Q7Z7J5 298 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 PEG10Q86TG7 708 aaKnown RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 LILRB4Q8NHJ6 448 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 MITD1Q8WV92 249 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 MRPS24Q96EL2 167 aaKnown RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 TMPRSS13Q9BYE2 586 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 LIME1Q9H400 295 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ZNF701Q9NV72 531 aaPredicted RBP5.62□□□□□ -1.51
USP47-201ENST00000305481 DCAF16Q9NXF7 216 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 OSGIN2Q9Y236 505 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 U3KQ87 197 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 CACNA1GO43497 2377 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 OR5H14A6NHG9 310 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 MCRIP1C9JLW8 97 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 BCL3P20749 454 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 HAAOP46952 286 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 TAS2R46P59540 309 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 IL13RA1P78552 427 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 ARL6IP1Q15041 203 aa5.62□□□□□ -1.51
USP47-201ENST00000305481 GABRA6Q16445 453 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms