RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CCL20P78556 96 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 QRFPP83859 136 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 TLE1Q04724 770 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 HEPN1Q6WQI6 88 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 Q8WTZ3 238 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 GNRHR2Q96P88 292 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 WWTR1Q9GZV5 400 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
TRUB1-201ENST00000298746 IGKV1D-8A0A087WSZ0 117 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 FAM221BA6H8Z2 402 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 MS4A18H0YCH9 400 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ADAM10O14672 748 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 SEMA4FO95754 770 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 GUSBP08236 651 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 NDUFB7P17568 137 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF41P51814 821 aaPredicted RBP10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF266Q14584 549 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 MS4A18Q3C1V0 323 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 DOK3Q7L591 496 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 OR5AS1Q8N127 324 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 LGI3Q8N145 548 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 CCDC54Q8NEL0 328 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 LMX1AQ8TE12 382 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 DYRK2Q92630 601 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 FGF14Q92915 247 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 TVP23CQ96ET8 276 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 MARS2Q96GW9 593 aaKnown RBP10.03□□□□□ -0.8
TRUB1-201ENST00000298746 MRGPRX1Q96LB2 322 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 CHST5Q9GZS9 411 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 IL23AQ9NPF7 189 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 PIGLQ9Y2B2 252 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 SERPINE3A8MV23 424 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 G0S2P27469 103 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 COL19A1Q14993 1142 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ARL6IP1Q15041 203 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 KHDC3LQ587J8 217 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 GPR157Q5UAW9 335 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 C14orf144Q96I85 54 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 FAM210BQ96KR6 192 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF442Q9H7R0 627 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 BLACEA4D250 179 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 SPRY1O43609 319 aaPredicted RBP10.03□□□□□ -0.8
TRUB1-201ENST00000298746 CXCL1P09341 107 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 FCARP24071 287 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 KIR2DL1P43626 348 aaPredicted RBP10.03□□□□□ -0.8
TRUB1-201ENST00000298746 RND3P61587 244 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 MFAP5Q13361 173 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 CYB5R2Q6BCY4 276 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 CMTM1Q8IZ96 169 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 NECAP1Q8NC96 275 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 SERINC1Q9NRX5 453 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 GPR173Q9NS66 373 aa10.03□□□□□ -0.8
TRUB1-201ENST00000298746 GEMIN2O14893 280 aaKnown RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 TLX3O43711 291 aaPredicted RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BKO60814 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BJP06899 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 CTSDP07339 412 aaPredicted RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 IFI6P09912 130 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 LYL1P12980 280 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 EPHA1P21709 976 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BOP23527 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BBP33778 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 NKX2-1P43699 371 aaPredicted RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BDP58876 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BCP62807 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 RUNX1Q01196 453 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST2H2BEQ16778 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 SLC22A25Q6T423 547 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 C9orf40Q8IXQ3 194 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 C1orf87Q8N0U7 546 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BHQ93079 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BNQ99877 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HIST1H2BMQ99879 126 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 RBM24Q9BX46 236 aaKnown RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 NKX2-4Q9H2Z4 354 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 NECAP2Q9NVZ3 263 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 GAB2Q9UQC2 676 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 HDGFL3Q9Y3E1 203 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 CCDC187A0A096LP49 1063 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 IGHV5-51A0A0C4DH38 117 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 FAM157AC9JC47 383 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 H3BP45 60 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 PPIHO43447 177 aaKnown RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 FBLP22087 321 aaKnown RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 RABIFP47224 123 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 IDH3GP51553 393 aaPredicted RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 DCAF7P61962 342 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 MRPS34P82930 218 aaKnown RBP10.02□□□□□ -0.81
TRUB1-201ENST00000298746 FOXF1Q12946 379 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 DPPA2Q7Z7J5 298 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 OR5T1Q8NG75 326 aa10.02□□□□□ -0.81
TRUB1-201ENST00000298746 OR5C1Q8NGR4 320 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms