RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 Q3ZCU0 254 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 PRR30Q53SZ7 412 aaPredicted RBP13.38□□□□□ -0.27
LSM6-201ENST00000296581 MOB3CQ70IA8 216 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 AQP3Q92482 292 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SLC7A11Q9UPY5 501 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 PQLC2LA1A4F0 135 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 INMT-MINDY4F8WBC2 141 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SMPD2O60906 423 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 RBBP9O75884 186 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SSTP61278 116 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
LSM6-201ENST00000296581 ZNF260Q3ZCT1 412 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 LGALSLQ3ZCW2 172 aaPredicted RBP13.38□□□□□ -0.27
LSM6-201ENST00000296581 SLC22A6Q4U2R8 563 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 PLCXD3Q63HM9 321 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 ASCL4Q6XD76 172 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SEH1LQ96EE3 360 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 BSNQ9UPA5 3926 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 ZGRF1Q86YA3 2104 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 A0A0A6YYD4 124 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 A0A1W2PP11 408 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 OR5H1A6NKK0 313 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 CD300LBA8K4G0 201 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 ZNF850A8MQ14 1090 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 A8MXK9 166 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 FABP1P07148 127 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 ATP1B3P54709 279 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 RPS27AP62979 156 aaKnown RBP13.37□□□□□ -0.27
LSM6-201ENST00000296581 OLFML2AQ68BL7 652 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 FAM169BQ8N8A8 192 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 S100A13Q99584 98 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 NICN1Q9BSH3 213 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 URM1Q9BTM9 101 aaKnown RBP13.37□□□□□ -0.27
LSM6-201ENST00000296581 BANF2Q9H503 90 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 HRASLSQ9HDD0 168 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 CRIM1Q9NZV1 1036 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 GPR160Q9UJ42 338 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 AMDHD2Q9Y303 409 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 NAP1L6A6NFF2 107 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 CRTAPO75718 401 aaPredicted RBP13.37□□□□□ -0.27
LSM6-201ENST00000296581 AGFG2O95081 481 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 IGLV1-44P01699 117 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 LPLP06858 475 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 MELTFP08582 738 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 VEGFCP49767 419 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 PRDX4Q13162 271 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 UNQ6494/PRO21346Q6UXR6 183 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 FBXW12Q6X9E4 464 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 FTMTQ8N4E7 242 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 FAM89BQ8N5H3 189 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 TAS2R8Q9NYW2 309 aa13.37□□□□□ -0.27
LSM6-201ENST00000296581 MRPL15Q9P015 296 aaKnown RBP13.37□□□□□ -0.27
LSM6-201ENST00000296581 ATMQ13315 3056 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 PIEZO2Q9H5I5 2752 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 MSTNO14793 375 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 PEX14O75381 377 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 MT-ND4P03905 459 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 SELLP14151 372 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 STPG2Q8N412 459 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 CMBLQ96DG6 245 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 PAPOLGQ9BWT3 736 aaKnown RBP13.36□□□□□ -0.27
LSM6-201ENST00000296581 TM2D1Q9BX74 207 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 MED28Q9H204 178 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 DPAGT1Q9H3H5 408 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 SLC25A15Q9Y619 301 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 GATCO43716 136 aaKnown RBP13.36□□□□□ -0.27
LSM6-201ENST00000296581 CSF1P09603 554 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 TMEM225BP0DP42 221 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 MGMTP16455 207 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 OPRM1P35372 400 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 ATRAIDQ6UW56 229 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 Q6ZTK2 550 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 PXT1Q8NFP0 134 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 STEAP2Q8NFT2 490 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 OR56B1Q8NGI3 324 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
LSM6-201ENST00000296581 CREB3L1Q96BA8 519 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 METTL9Q9H1A3 318 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 OR51B6Q9H340 312 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 ZMAT3Q9HA38 289 aaKnown RBP13.36□□□□□ -0.27
LSM6-201ENST00000296581 MED9Q9NWA0 146 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 ZNF222Q9UK12 451 aa13.36□□□□□ -0.27
LSM6-201ENST00000296581 TMEM235A6NFC5 223 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 FOXI3A8MTJ6 420 aaPredicted RBP13.35□□□□□ -0.27
LSM6-201ENST00000296581 ZNF35P13682 527 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 PSMB1P20618 241 aaKnown RBP13.35□□□□□ -0.27
LSM6-201ENST00000296581 ACTBP60709 375 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 PPP1CBP62140 327 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 ACTG1P63261 375 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 CEACAM21Q3KPI0 293 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 CDNFQ49AH0 187 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 ZDHHC23Q8IYP9 409 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 CHST4Q8NCG5 386 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 OR11H7Q8NGC8 314 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms