RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 PLEKHJ1Q9NW61 149 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 CBY3A6NI87 242 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
CLDN1-201ENST00000295522 CA11O75493 328 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 OPN1LWP04000 364 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 CHRM2P08172 466 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 ELLP55199 621 aaPredicted RBP8.98□□□□□ -0.97
CLDN1-201ENST00000295522 BTG2P78543 158 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 NPSR1Q6W5P4 371 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 C6orf201Q7Z4U5 140 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 CCL4L1Q8NHW4 92 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 CDCA3Q99618 268 aaPredicted RBP8.98□□□□□ -0.97
CLDN1-201ENST00000295522 RNF208Q9H0X6 261 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 PARD6AQ9NPB6 346 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 DEC1Q9P2X7 70 aa8.98□□□□□ -0.97
CLDN1-201ENST00000295522 EML5Q05BV3 1969 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 A0A0A6YYD4 124 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 LDLRAD4O15165 306 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 CDC14BO60729 498 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 EML2O95834 649 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 HPNP05981 417 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 FGF5P12034 268 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 SFTPDP35247 375 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 EGR4Q05215 589 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 C1orf100Q5SVJ3 147 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 LINC00114Q6XXX2 140 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ANKRD33Q7Z3H0 272 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 BATF2Q8N1L9 274 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 SLC39A11Q8N1S5 342 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 C11orf42Q8N5U0 333 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 OR13D1Q8NGV5 346 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 OR14C36Q8NHC7 312 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 C16orf52Q8NHV5 167 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 POC1BQ8TC44 478 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 TBX15Q96SF7 602 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 SCRT1Q9BWW7 348 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 DUSP15Q9H1R2 295 aaPredicted RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 PLA2G3Q9NZ20 509 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 IRF2P14316 349 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 IGFBP3P17936 291 aaPredicted RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 RPL27P61353 136 aaKnown RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 EWSR1Q01844 656 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ZNF266Q14584 549 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 PCK2Q16822 640 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 HNRNPA1L2Q32P51 320 aaKnown RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ZNF765Q7L2R6 523 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 SSX7Q7RTT5 188 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 IL22RA1Q8N6P7 574 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 BEND2Q8NDZ0 799 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 OR2AJ1Q8NGZ0 328 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 FAM3CQ92520 227 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ANKRD9Q96BM1 317 aaPredicted RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 MSL2Q9HCI7 577 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 PNO1Q9NRX1 252 aaKnown RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 MED29Q9NX70 200 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 TBC1D29Q9UFV1 150 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 PPIAL4AQ9Y536 164 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 V9GYS6 101 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 TRAV34A0A0B4J273 112 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 NPIPA5E9PKD4 350 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 LYL1P12980 280 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 HLA-DOBP13765 273 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 SELEP16581 610 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 UCP3P55916 312 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 TMEM50BP56557 158 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 VAX1Q5SQQ9 334 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 FBXO46Q6PJ61 603 aaPredicted RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 FAM57BQ71RH2 274 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 GPHA2Q96T91 129 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ZFYVE21Q9BQ24 234 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 ZNF665Q9H7R5 613 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 PATZ1Q9HBE1 687 aaKnown RBP8.97□□□□□ -0.97
CLDN1-201ENST00000295522 DNAJC4Q9NNZ3 241 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 NPIPA1Q9UND3 350 aa8.97□□□□□ -0.97
CLDN1-201ENST00000295522 EDDM13A0A1B0GTR0 161 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 H0YIG0 161 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 GSTP1P09211 210 aaKnown RBP8.96□□□□□ -0.97
CLDN1-201ENST00000295522 ZNF728P0DKX0 622 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 ZNF41P51814 821 aaPredicted RBP8.96□□□□□ -0.97
CLDN1-201ENST00000295522 ICAM4Q14773 271 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 CARD17Q5XLA6 110 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 SLC16A14Q7RTX9 510 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 C20orf196Q8IYI0 205 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 TSACCQ96A04 125 aaPredicted RBP8.96□□□□□ -0.97
CLDN1-201ENST00000295522 GINS3Q9BRX5 216 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 PCGF1Q9BSM1 259 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 KIAA1456Q9P272 454 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 RP1P56715 2156 aa8.96□□□□□ -0.97
CLDN1-201ENST00000295522 ANAPC1Q9H1A4 1944 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 A0A1B0GUS0 222 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 H7BYZ3 331 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 IL18BPO95998 194 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 ASAH2BP0C7U1 165 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 EPHA1P21709 976 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 VEGFBP49765 207 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 RTP5Q14D33 572 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 ADAMTSL4Q6UY14 1074 aa8.96□□□□□ -0.98
CLDN1-201ENST00000295522 ATG4DQ86TL0 474 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms