RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 RCC1P18754 421 aaPredicted RBP11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 SERPINA2P20848 420 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 PNLIPRP2P54317 469 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 CLRN1P58418 232 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 S100A10P60903 97 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 PPIAP62937 165 aaKnown RBP11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 TMEM176BQ3YBM2 270 aaPredicted RBP11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 ABLIM2Q6H8Q1 611 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 C5orf24Q7Z6I8 188 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 SULF2Q8IWU5 870 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 CPT1CQ8TCG5 803 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 PIGTQ969N2 578 aa11.67□□□□□ -0.54
KCNIP3-201ENST00000295225 LNP1A1A4G5 178 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 CXorf65A6NEN9 183 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 PATE4P0C8F1 98 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF20P17024 532 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 CNR1P21554 472 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 NFYBP25208 207 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 HTR5AP47898 357 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 PLXDC2Q6UX71 529 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZSCAN4Q8NAM6 433 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 CHODLQ9H9P2 273 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 A0A1B0GTI1 187 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 A0A1B0GX78 115 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 CBY3A6NI87 242 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 TMEM200CA6NKL6 621 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 LMO7DNF2Z398 122 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 SFTPBP07988 381 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 NQO2P16083 231 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 SCAND1P57086 179 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 COLCA1Q6ZS62 124 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 INO80EQ8NBZ0 244 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 SEMA6DQ8NFY4 1073 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF837Q96EG3 531 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 PHB2Q99623 299 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 METTL7AQ9H8H3 244 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 MRPS28Q9Y2Q9 187 aaKnown RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF705EA8MWA4 302 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 FBXO24O75426 580 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF17P17021 662 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 CD27P26842 260 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 NKAPLQ5M9Q1 402 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 FBXW9Q5XUX1 488 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 SYT13Q7L8C5 426 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 SLC25A42Q86VD7 318 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 NAXDQ8IW45 347 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 PUSL1Q8N0Z8 303 aaKnown RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF283Q8N7M2 679 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 RNF133Q8WVZ7 376 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 EDAQ92838 391 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF501Q96CX3 271 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 PRRT1Q99946 306 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 LPAR5Q9H1C0 372 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 CHST11Q9NPF2 352 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF701Q9NV72 531 aaPredicted RBP11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
KCNIP3-201ENST00000295225 LILRA5A6NI73 299 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 BCL2L11O43521 198 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 TLX3O43711 291 aaPredicted RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 STAG3L2P0CL84 134 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 TMEM244Q5VVB8 128 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 HAGHLQ6PII5 290 aaPredicted RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF430Q9H8G1 570 aaPredicted RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 DIDO1Q9BTC0 2240 aaKnown RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 IGKV1-9A0A0C4DH69 117 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 OR5H15A6NDH6 313 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 VSTM2BA6NLU5 285 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 SLC33A1O00400 549 aaPredicted RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 ANGPTL7O43827 346 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 CD74P04233 296 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 FAHP16930 419 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 RRADP55042 308 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 ZNF239Q16600 458 aaKnown RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 ANKRD55Q3KP44 614 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 LYPD6Q86Y78 171 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 TMEM230Q96A57 120 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 RAB3CQ96E17 227 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 RCC1LQ96I51 464 aaKnown RBP11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 GNRHR2Q96P88 292 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 RNF2Q99496 336 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 RNF126Q9BV68 326 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 RAB22AQ9UL26 194 aa11.65□□□□□ -0.54
KCNIP3-201ENST00000295225 IFI6P09912 130 aa11.64□□□□□ -0.55
KCNIP3-201ENST00000295225 GABRR1P24046 479 aa11.64□□□□□ -0.55
KCNIP3-201ENST00000295225 S100A7P31151 101 aa11.64□□□□□ -0.55
KCNIP3-201ENST00000295225 NOVA1P51513 510 aaKnown RBP11.64□□□□□ -0.55
KCNIP3-201ENST00000295225 QRFPP83859 136 aa11.64□□□□□ -0.55
KCNIP3-201ENST00000295225 DNLZQ5SXM8 178 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms