RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 A0A1W2PQ45 241 aaPredicted RBP12.49□□□□□ -0.41
FUBP1-201ENST00000294623 A0A1W2PQY0 241 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 CCL1P22362 96 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 CCR2P41597 374 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 DAP3P51398 398 aaKnown RBP12.49□□□□□ -0.41
FUBP1-201ENST00000294623 CENPVQ7Z7K6 275 aaPredicted RBP12.49□□□□□ -0.41
FUBP1-201ENST00000294623 SSC4DQ8WTU2 575 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 HIST1H2AAQ96QV6 131 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 ATG101Q9BSB4 218 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 HEATR5AQ86XA9 2040 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 DUXBA0A1W2PPF3 345 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 ZNF878C9JN71 531 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
FUBP1-201ENST00000294623 IFNA1P01562 189 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 APLNRP35414 380 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 ABCA11PQ4W5N1 156 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 ZNF761Q86XN6 746 aaPredicted RBP12.49□□□□□ -0.41
FUBP1-201ENST00000294623 ZNF248Q8NDW4 579 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 TSLPQ969D9 159 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 Q9N2K0 584 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
FUBP1-201ENST00000294623 C11orf98E9PRG8 122 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 TYMSP04818 313 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 FGF5P12034 268 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 FOSL2P15408 326 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 DTYMKP23919 212 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 COL10A1Q03692 680 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 FAM78AQ5JUQ0 283 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 FAM185AQ8N0U4 392 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 OR51T1Q8NGJ9 327 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 BAHD1Q8TBE0 780 aaPredicted RBP12.48□□□□□ -0.41
FUBP1-201ENST00000294623 DAZLQ92904 295 aaKnown RBP12.48□□□□□ -0.41
FUBP1-201ENST00000294623 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 OR10A5Q9H207 317 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 MRPS2Q9Y399 296 aaKnown RBP12.48□□□□□ -0.41
FUBP1-201ENST00000294623 MPDZO75970 2070 aa12.48□□□□□ -0.41
FUBP1-201ENST00000294623 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
FUBP1-201ENST00000294623 A0A1W2PQD3 144 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 PLPP3O14495 311 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 NPIPB7O75200 414 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 GNRH1P01148 92 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 HPNP05981 417 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
FUBP1-201ENST00000294623 ZNF728P0DKX0 622 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 BCL2P10415 239 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 PGCP20142 388 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 CTGFP29279 349 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 PIGPP57054 158 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 CD226Q15762 336 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 CMTM1Q8IZ96 169 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 ZFP62Q8NB50 900 aaPredicted RBP12.47□□□□□ -0.41
FUBP1-201ENST00000294623 C16orf52Q8NHV5 167 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 OR5B12Q96R08 314 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 ZBP1Q9H171 429 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 LYRM2Q9NU23 88 aaPredicted RBP12.47□□□□□ -0.41
FUBP1-201ENST00000294623 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 APBB3O95704 486 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 GP1BBP13224 206 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 BCKDHBP21953 392 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 POLR2HP52434 150 aaKnown RBP12.47□□□□□ -0.41
FUBP1-201ENST00000294623 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 C4orf17Q53FE4 359 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 ZNF774Q6NX45 483 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 DOK3Q7L591 496 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 CISD2Q8N5K1 135 aaKnown RBP12.47□□□□□ -0.41
FUBP1-201ENST00000294623 SLC38A9Q8NBW4 561 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 GAL3ST2Q9H3Q3 398 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 GPR173Q9NS66 373 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 FKBP11Q9NYL4 201 aa12.47□□□□□ -0.41
FUBP1-201ENST00000294623 PRRT4C9JH25 899 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 ITGB1BP1O14713 200 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 UTS2O95399 124 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 CEBPGP53567 150 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 TAS2R30P59541 319 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 IL24Q13007 206 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 KCNMB1Q16558 191 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 GALNTL5Q7Z4T8 443 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.41
FUBP1-201ENST00000294623 PTPMT1Q8WUK0 201 aaPredicted RBP12.46□□□□□ -0.41
FUBP1-201ENST00000294623 RTN4IP1Q8WWV3 396 aaPredicted RBP12.46□□□□□ -0.41
FUBP1-201ENST00000294623 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 DEC1Q9P2X7 70 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 ANXA10Q9UJ72 324 aa12.46□□□□□ -0.41
FUBP1-201ENST00000294623 B4E171 279 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 CCL16O15467 120 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 XRCC2O43543 280 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 TSPAN7P41732 249 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 OR3A4PP47883 348 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 HIST1H3AP68431 136 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 PRSS41Q7RTY9 318 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 AGBL5Q8NDL9 886 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 DTD1Q8TEA8 209 aa12.46□□□□□ -0.42
FUBP1-201ENST00000294623 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms