RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 CDC14BO60729 498 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 MTRF1O75570 445 aaKnown RBP14.57□□□□□ -0.08
CPSF4-201ENST00000292476 DUS4LO95620 317 aaKnown RBP14.57□□□□□ -0.08
CPSF4-201ENST00000292476 COX5BP10606 129 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF250P15622 560 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 GNB3P16520 340 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 HRH1P35367 487 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 SLC6A9P48067 706 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 ARL6IP1Q15041 203 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 C11orf87Q6NUJ2 197 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 HSD17B13Q7Z5P4 300 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-201ENST00000292476 COMMD2Q86X83 199 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 HOGA1Q86XE5 327 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 PDZD9Q8IXQ8 264 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 OR14K1Q8NGZ2 314 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 MRGPRFQ96AM1 343 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 CMBLQ96DG6 245 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 PHYHIPLQ96FC7 376 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 OCSTAMPQ9BR26 566 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 TMEM59Q9BXS4 323 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 OR10A2Q9H208 303 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 C12orf49Q9H741 205 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 TNFSF18Q9UNG2 199 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 KCNK7Q9Y2U2 307 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 MMP7P09237 267 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-201ENST00000292476 CRYGSP22914 178 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 PSG4Q00888 419 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 PPP1R1AQ13522 171 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 GUSBP1Q15486 140 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 NKPD1Q17RQ9 610 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 ALKAL2Q6UX46 152 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 FAM57BQ71RH2 274 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 CD163Q86VB7 1156 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 FAM89BQ8N5H3 189 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 PNLDC1Q8NA58 520 aaKnown RBP14.56□□□□□ -0.08
CPSF4-201ENST00000292476 PP6455Q8WZ26 134 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 FBXW5Q969U6 566 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 RAB3CQ96E17 227 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 SCGB3A2Q96PL1 93 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 CST11Q9H112 138 aa14.56□□□□□ -0.08
CPSF4-201ENST00000292476 TMA7Q9Y2S6 64 aaKnown RBP14.56□□□□□ -0.08
CPSF4-201ENST00000292476 PHF3Q92576 2039 aaKnown RBP14.56□□□□□ -0.08
CPSF4-201ENST00000292476 A0A0B4J2A0 478 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 MBD3L4A6NDZ8 208 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 MBD3L3A6NE82 208 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 MBD3L5A6NJ08 208 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 A8MXK9 166 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 CA11O75493 328 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 HCKP08631 526 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 PLA2G2AP14555 144 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 HOXB1P14653 301 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 ABOP16442 354 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 HTR5AP47898 357 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 IL13RA1P78552 427 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 PLP2Q04941 152 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF324BQ6AW86 544 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 RTL6Q6ICC9 239 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF774Q6NX45 483 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 GVQW1Q8N7I0 195 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 OR4K15Q8NH41 348 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 MBD3L2Q8NHZ7 208 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 PCNPQ8WW12 178 aaKnown RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 PDCD10Q9BUL8 212 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 WNT5BQ9H1J7 359 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 RGCCQ9H4X1 137 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 SHPKQ9UHJ6 478 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 V9GYS6 101 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 A0A0A6YYD4 124 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 KANTRA0A1W2PQU2 76 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 DBX1A6NMT0 343 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 MFNGO00587 321 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 BCL2L11O43521 198 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 MPIG6BO95866 241 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 TLE1Q04724 770 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 PPA1Q15181 289 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 KRTAP27-1Q3LI81 207 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 TFAP2EQ6VUC0 442 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 Q6ZT83 130 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 ACOT7LQ6ZUV0 252 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 OR1K1Q8NGR3 316 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 TERB2Q8NHR7 220 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 COQ8AQ8NI60 647 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 FAM57AQ8TBR7 257 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 FAM71F1Q96KD3 344 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-201ENST00000292476 DNTTIP1Q9H147 329 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF319Q9P2F9 582 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 PRSS50Q9UI38 385 aa14.55□□□□□ -0.08
CPSF4-201ENST00000292476 OR2AT4A6NND4 320 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 DHRS7CA6NNS2 312 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 DHRS3O75911 302 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 CSN2P05814 226 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 FGF2P09038 288 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 OR3A4PP47883 348 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 CYCSP99999 105 aaKnown RBP14.54□□□□□ -0.08
CPSF4-201ENST00000292476 OR52W1Q6IF63 320 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 CNEP1R1Q8N9A8 125 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 Q8NA96 180 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 C9orf106Q8NAJ2 232 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 TMEM185AQ8NFB2 350 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 ST8SIA2Q92186 375 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms