RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PHYHD1Q5SRE7 291 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 LYZL2Q7Z4W2 148 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 OR10D3Q8NH80 312 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 OR1F12Q8NHA8 337 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 SGK3Q96BR1 496 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 ABI3Q9P2A4 366 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 AMDHD2Q9Y303 409 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 TBPP20226 339 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 GPM6AP51674 278 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 PUSL1Q8N0Z8 303 aaKnown RBP13.93□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF611Q8N823 705 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 OR52H1Q8NGJ2 320 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 ISOC2Q96AB3 205 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 SPACA1Q9HBV2 294 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 REV3LO60673 3130 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 PTPRSQ13332 1948 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 A0A0A6YYD4 124 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 LOC102725191A0A1B0GVB3 256 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 OR2B8PP59922 312 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 MKXQ8IYA7 352 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 PP6455Q8WZ26 134 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
SMAD6-201ENST00000288840 BCO1Q9HAY6 547 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 IGKV1-9A0A0C4DH69 117 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 TXNL1O43396 289 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 LTC4SQ16873 150 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 HOGA1Q86XE5 327 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 OR5T1Q8NG75 326 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 LHFPL5Q8TAF8 219 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 CPT1CQ8TCG5 803 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 RAB33BQ9H082 229 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 TLNRD1Q9H1K6 362 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 GPR132Q9UNW8 380 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 TMEM14DPA8MWL7 114 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 TRAPPC2LH3BP13 241 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 SERPINE2P07093 398 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 SLC25A47Q6Q0C1 308 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 PCNX1Q96RV3 2341 aa13.92□□□□□ -0.18
SMAD6-201ENST00000288840 NCOA6Q14686 2063 aaPredicted RBP13.92□□□□□ -0.18
SMAD6-201ENST00000288840 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
SMAD6-201ENST00000288840 SERPINE3A8MV23 424 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 SSSCA1O60232 199 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 CD74P04233 296 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 FGF2P09038 288 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 THBS4P35443 961 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 NOVA1P51513 510 aaKnown RBP13.91□□□□□ -0.18
SMAD6-201ENST00000288840 SRSF3P84103 164 aaKnown RBP13.91□□□□□ -0.18
SMAD6-201ENST00000288840 GPR157Q5UAW9 335 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 PRSS54Q6PEW0 395 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 OSR2Q8N2R0 312 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
SMAD6-201ENST00000288840 OR14K1Q8NGZ2 314 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 PRRX2Q99811 253 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 FAM212BQ9NTI7 297 aaPredicted RBP13.91□□□□□ -0.18
SMAD6-201ENST00000288840 PABPC1L2AQ5JQF8 200 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 ZFP62Q8NB50 900 aaPredicted RBP13.91□□□□□ -0.18
SMAD6-201ENST00000288840 CNTNAP3Q9BZ76 1288 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF581Q9P0T4 197 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 MCTS1Q9ULC4 181 aaKnown RBP13.91□□□□□ -0.18
SMAD6-201ENST00000288840 TIMM10BQ9Y5J6 103 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 P2RY4P51582 365 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 OR2B11Q5JQS5 317 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 DEFB127Q9H1M4 99 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 RAB18Q9NP72 206 aa13.91□□□□□ -0.18
SMAD6-201ENST00000288840 SFTA3P0C7M3 94 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 HAGHQ16775 308 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 OR56B2PQ8NGI1 322 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 ANXA10Q9UJ72 324 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 IGKV1D-8A0A087WSZ0 117 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 C1orf196B1AJZ1 125 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 RNASEK-C17orf49H0YIS7 233 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 ST8SIA3O43173 380 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 ANOS1P23352 680 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF133P52736 654 aaPredicted RBP13.9□□□□□ -0.18
SMAD6-201ENST00000288840 RAB5BP61020 215 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 MIDNQ504T8 468 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 FAM166AQ6J272 317 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF441Q8N8Z8 693 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 PSMF1Q92530 271 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 FBXO17Q96EF6 278 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 LUZP4Q9P127 313 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 B4GALT7Q9UBV7 327 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 HS3ST3B1Q9Y662 390 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 A0A1B0GTQ1 180 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 E9PLN8 166 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 C3orf80F5H4A9 247 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 H0YIZ8 118 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF529Q6P280 563 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 C5orf24Q7Z6I8 188 aa13.9□□□□□ -0.18
SMAD6-201ENST00000288840 FHITP49789 147 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 RAB11FIP2Q7L804 512 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.89□□□□□ -0.19
SMAD6-201ENST00000288840 LGI3Q8N145 548 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 OIT3Q8WWZ8 545 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 HAS2Q92819 552 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 SUCNR1Q9BXA5 334 aa13.89□□□□□ -0.19
SMAD6-201ENST00000288840 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms