RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ANKRD31Q8N7Z5 1873 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 M6PRP20645 277 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 IGFBP7Q16270 282 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 TMED6Q8WW62 240 aa16.41■□□□□ 0.22
PCDH1-201ENST00000287008 ZNF721Q8TF20 911 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 FAAP24Q9BTP7 215 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 TTTY12Q9BZ98 90 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 H3BP45 60 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 TIGITQ495A1 244 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM171Q8WVE6 324 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 MTCH1Q9NZJ7 389 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 C1QBP02746 253 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 PRSS12P56730 875 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 FOXL2P58012 376 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 TMEM41BQ5BJD5 291 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 MESTQ5EB52 335 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 INO80CQ6PI98 192 aaPredicted RBP16.4■□□□□ 0.22
PCDH1-201ENST00000287008 OR8B12Q8NGG6 310 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 ACY3Q96HD9 319 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 GSX2Q9BZM3 304 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 GPR35Q9HC97 309 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 OSGIN2Q9Y236 505 aa16.4■□□□□ 0.22
PCDH1-201ENST00000287008 DEFB108AA8MXU0 73 aa16.39■□□□□ 0.22
PCDH1-201ENST00000287008 HOXD4P09016 255 aaPredicted RBP16.39■□□□□ 0.22
PCDH1-201ENST00000287008 ZNF17P17021 662 aa16.39■□□□□ 0.22
PCDH1-201ENST00000287008 SSX8Q7RTT4 187 aa16.39■□□□□ 0.22
PCDH1-201ENST00000287008 IL36GQ9NZH8 169 aa16.39■□□□□ 0.22
PCDH1-201ENST00000287008 RNF24Q9Y225 148 aa16.39■□□□□ 0.22
PCDH1-201ENST00000287008 ALPK2Q86TB3 2170 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 TMPRSS3P57727 454 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 TXN2Q99757 166 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 SRRQ9GZT4 340 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 UBTD1Q9HAC8 227 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 SH2D7A6NKC9 451 aaPredicted RBP16.39■□□□□ 0.21
PCDH1-201ENST00000287008 FCGR3BO75015 233 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 RPL35P42766 123 aaKnown RBP16.39■□□□□ 0.21
PCDH1-201ENST00000287008 ZFP36L2P47974 494 aaKnown RBP16.39■□□□□ 0.21
PCDH1-201ENST00000287008 TGIF1Q15583 401 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 C6orf201Q7Z4U5 140 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 CDH26Q8IXH8 852 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 PATZ1Q9HBE1 687 aaKnown RBP16.39■□□□□ 0.21
PCDH1-201ENST00000287008 TINAGQ9UJW2 476 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 AMMECR1Q9Y4X0 333 aaPredicted RBP16.39■□□□□ 0.21
PCDH1-201ENST00000287008 TRBV5-3A0A0A0MS03 114 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 FOXO1Q12778 655 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 KRTCAP3Q53RY4 240 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 TOR2AQ5JU69 321 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 BARX1Q9HBU1 254 aaPredicted RBP16.39■□□□□ 0.21
PCDH1-201ENST00000287008 CES1P1Q9UKY3 287 aa16.39■□□□□ 0.21
PCDH1-201ENST00000287008 SEMG1P04279 462 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 OR3A1P47881 315 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 OXA1LQ15070 435 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 LINC00303Q3SY05 128 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 TUBG2Q9NRH3 451 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 MASP2O00187 686 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 TMPRSS2O15393 492 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 FUCA1P04066 466 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF439Q8NDP4 499 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 DTX4Q9Y2E6 619 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 SCAND1P57086 179 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 MPPED2Q15777 294 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 ZFP62Q8NB50 900 aaPredicted RBP16.38■□□□□ 0.21
PCDH1-201ENST00000287008 BMI1P35226 326 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 Q3ZCU0 254 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 MRGPRDQ8TDS7 321 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 ADGRG7Q96K78 797 aa16.38■□□□□ 0.21
PCDH1-201ENST00000287008 MRM2Q9UI43 246 aaKnown RBP16.38■□□□□ 0.21
PCDH1-201ENST00000287008 COX7A2P2O60397 106 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 TAGLN2P37802 199 aaKnown RBP16.37■□□□□ 0.21
PCDH1-201ENST00000287008 TDRD6O60522 2096 aaKnown RBP16.37■□□□□ 0.21
PCDH1-201ENST00000287008 ANKRD34CP0C6C1 535 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 OR3A4PP47883 348 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 DBX2Q6ZNG2 339 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 MED30Q96HR3 178 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 ABCA7Q8IZY2 2146 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 GPR179Q6PRD1 2367 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 OR13C7P0DN81 318 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 BRS3P32247 399 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 RTP5Q14D33 572 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 SP6Q3SY56 376 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 TMEM251Q8N6I4 163 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 LILRB4Q8NHJ6 448 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 PPP1R1CQ8WVI7 109 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 PIGMQ9H3S5 423 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF331Q9NQX6 463 aaPredicted RBP16.37■□□□□ 0.21
PCDH1-201ENST00000287008 C20orf202A1L168 122 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 MAGEB1P43366 347 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 TIPARPQ7Z3E1 657 aaKnown RBP16.37■□□□□ 0.21
PCDH1-201ENST00000287008 LRRTM1Q86UE6 522 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 OR8B3Q8NGG8 313 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 OR4D11Q8NGI4 311 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 OR8B2Q96RD0 313 aa16.37■□□□□ 0.21
PCDH1-201ENST00000287008 BRWD3Q6RI45 1802 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 FPR2P25090 351 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 CALCRP30988 508 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 HIKESHIQ53FT3 197 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 FAM122BQ7Z309 247 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 CADM3Q8N126 398 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 OR6S1Q8NH40 331 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms