RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CRYBA4P53673 196 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 PFN3P60673 137 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 BCL2L1Q07817 233 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 KIAA0141Q14154 515 aaPredicted RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 TRAM1Q15629 374 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 TTLL9Q3SXZ7 439 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 CT45A1Q5HYN5 189 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 WDR25Q64LD2 544 aaPredicted RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 NPSR1Q6W5P4 371 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 H2AFVQ71UI9 128 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 GDPD3Q7L5L3 318 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 DPPA2Q7Z7J5 298 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 THOC6Q86W42 341 aaKnown RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 LACC1Q8IV20 430 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 SLC22A15Q8IZD6 547 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 FBXL14Q8N1E6 418 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 SLC25A45Q8N413 288 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 RBMXL3Q8N7X1 1067 aaKnown RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 OR4C6Q8NH72 309 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 OR1L3Q8NH93 324 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 CT45A3Q8NHU0 189 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 SPATA3Q8NHX4 192 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 GATAD1Q8WUU5 269 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 APOBEC4Q8WW27 367 aaKnown RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 DYRK2Q92630 601 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 TMEM56Q96MV1 263 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 SCGB3A2Q96PL1 93 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 OR5B12Q96R08 314 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 TBX15Q96SF7 602 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 KLF6Q99612 283 aaPredicted RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 ZNF2Q9BSG1 426 aaPredicted RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 SNRNP25Q9BV90 132 aaKnown RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 ZNF385DQ9H6B1 395 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 ZNF430Q9H8G1 570 aaPredicted RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 PDFQ9HBH1 243 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 BTNL2Q9UIR0 455 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 ASF1AQ9Y294 204 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 RPL36Q9Y3U8 105 aaKnown RBP3.75□□□□□ -1.81
CD44-202ENST00000278385 ATG2BQ96BY7 2078 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 MYOFQ9NZM1 2061 aa3.75□□□□□ -1.81
CD44-202ENST00000278385 KIAA1549LQ6ZVL6 1849 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 SDK1Q7Z5N4 2213 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 A0A087X0T9 212 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 A0A1W2PPI3 338 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 A0A1W2PRG6 482 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 TRABD2BA6NFA1 517 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 SMIM9A6NGZ8 99 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF724A8MTY0 619 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 C11orf98E9PRG8 122 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 KCNK1O00180 336 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF593O00488 134 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ENTPD6O75354 484 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 CNIH1O95406 144 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 CLDN14O95500 239 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 TNFP01375 233 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 CD8AP01732 235 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 GYPCP04921 128 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 HOXC4P09017 264 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 LINC00614P0C842 121 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 FAM228BP0C875 321 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 GTF2F2P13984 249 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF250P15622 560 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF12P17014 697 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 HRH1P35367 487 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 DLX6P56179 175 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF121P58317 390 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 RND3P61587 244 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 AP1S1P61966 158 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 TGFBR3Q03167 851 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF154Q13106 437 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 TFDP2Q14188 446 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 FZD2Q14332 565 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 KIR2DS3Q14952 304 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 TOMM34Q15785 309 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 ZBED5Q49AG3 693 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ACER2Q5QJU3 275 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 FAM27D1Q5T7N8 215 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 C1orf146Q5VVC0 180 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 HBMQ6B0K9 141 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 TRIM40Q6P9F5 258 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 TMEM207Q6UWW9 146 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 FAM19A5Q7Z5A7 132 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 TMEM144Q7Z5S9 345 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 PTAR1Q7Z6K3 402 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 PIANPQ8IYJ0 282 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 CPNE9Q8IYJ1 553 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 SLC22A18ASQ8N1D0 253 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 OR10W1Q8NGF6 305 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 OR2G2Q8NGZ5 317 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 OR2T11Q8NH01 316 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 C11orf45Q8TAV5 145 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 HAVCR2Q8TDQ0 301 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 RERGQ96A58 199 aaPredicted RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 SEC22AQ96IW7 307 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 FAM210BQ96KR6 192 aa3.74□□□□□ -1.81
CD44-202ENST00000278385 ZNF385AQ96PM9 386 aaKnown RBP3.74□□□□□ -1.81
CD44-202ENST00000278385 RBP7Q96R05 134 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms