RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 CELF2-AS1Q8N7Q2 184 aa12.03□□□□□ -0.48
SS18-201ENST00000269137 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
SS18-201ENST00000269137 LRRC46Q96FV0 321 aa12.03□□□□□ -0.48
SS18-201ENST00000269137 ZMAT3Q9HA38 289 aaKnown RBP12.03□□□□□ -0.48
SS18-201ENST00000269137 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
SS18-201ENST00000269137 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.48
SS18-201ENST00000269137 LRP5LA4QPB2 252 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 DPRXA6NFQ7 191 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 TMEM210A6NLX4 147 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 FAM90A27PA6NNH2 459 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 MFNGO00587 321 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 GNB3P16520 340 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 BLVRBP30043 206 aaPredicted RBP12.02□□□□□ -0.48
SS18-201ENST00000269137 SLC6A1P30531 599 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 KIR2DL3P43628 341 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 ACTBP60709 375 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 ACTG1P63261 375 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 IL24Q13007 206 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 MSMPQ1L6U9 139 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 HAGHLQ6PII5 290 aaPredicted RBP12.02□□□□□ -0.48
SS18-201ENST00000269137 FBXL14Q8N1E6 418 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 OR13G1Q8NGZ3 307 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 ENKURQ8TC29 256 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 ARHGAP5-AS1Q96IT6 56 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 NEDD4LQ96PU5 975 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 ZNF107Q9UII5 783 aaPredicted RBP12.02□□□□□ -0.48
SS18-201ENST00000269137 FZR1Q9UM11 496 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.48
SS18-201ENST00000269137 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 FAM240BA0A1B0GVZ2 78 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 PRSS44E7EML9 344 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 J3QT63 122 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 MLNRO43193 412 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 CSF1P09603 554 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 NPBWR2P48146 333 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 EIF2B2P49770 351 aaKnown RBP12.02□□□□□ -0.49
SS18-201ENST00000269137 SORDQ00796 357 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 Q6ZR03 302 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 RADILQ96JH8 1075 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 RHOFQ9HBH0 211 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 NKIRAS2Q9NYR9 191 aa12.02□□□□□ -0.49
SS18-201ENST00000269137 ELF5Q9UKW6 265 aaPredicted RBP12.02□□□□□ -0.49
SS18-201ENST00000269137 ADGRG4Q8IZF6 3080 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A18PA6NE21 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A16PA6NEW6 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 NAP1L6A6NFF2 107 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A20PA6NIJ5 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A7PA6NKC0 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A22PA8MWA6 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A23PA8MXZ1 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 CA11O75493 328 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A15PP0C7V4 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A13PP0C7W8 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A14PP0C7W9 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 FAM90A24PP0C7X0 464 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 BCL3P20749 454 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 BTCP35070 178 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 RBM11P57052 281 aaKnown RBP12.01□□□□□ -0.49
SS18-201ENST00000269137 KLF3P57682 345 aaPredicted RBP12.01□□□□□ -0.49
SS18-201ENST00000269137 FGF12P61328 243 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 BSPH1Q075Z2 132 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 OLFML2AQ68BL7 652 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 WDR86Q86TI4 376 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 CA5BP1Q8WTZ4 195 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 ST8SIA4Q92187 359 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 SLAMF9Q96A28 289 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 CNTNAP3BQ96NU0 1288 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 CNTNAP3Q9BZ76 1288 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 CXXC4Q9H2H0 198 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 HRASLSQ9HDD0 168 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 KCNJ16Q9NPI9 418 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 NDRG3Q9UGV2 375 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 HSF4Q9ULV5 492 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 ST3GAL6Q9Y274 331 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 EPG5Q9HCE0 2579 aa12.01□□□□□ -0.49
SS18-201ENST00000269137 ICE1Q9Y2F5 2266 aa12□□□□□ -0.49
SS18-201ENST00000269137 NKX2-6A6NCS4 301 aa12□□□□□ -0.49
SS18-201ENST00000269137 SERPINE3A8MV23 424 aa12□□□□□ -0.49
SS18-201ENST00000269137 H0YL77 283 aa12□□□□□ -0.49
SS18-201ENST00000269137 ABCD4O14678 606 aa12□□□□□ -0.49
SS18-201ENST00000269137 SYNGR1O43759 233 aa12□□□□□ -0.49
SS18-201ENST00000269137 ACAA1P09110 424 aaPredicted RBP12□□□□□ -0.49
SS18-201ENST00000269137 GABRR1P24046 479 aa12□□□□□ -0.49
SS18-201ENST00000269137 MZT1Q08AG7 82 aa12□□□□□ -0.49
SS18-201ENST00000269137 CARTPTQ16568 116 aa12□□□□□ -0.49
SS18-201ENST00000269137 TAF9Q16594 264 aa12□□□□□ -0.49
SS18-201ENST00000269137 ST3GAL2Q16842 350 aa12□□□□□ -0.49
SS18-201ENST00000269137 PCGF3Q3KNV8 242 aa12□□□□□ -0.49
SS18-201ENST00000269137 C4orf17Q53FE4 359 aa12□□□□□ -0.49
SS18-201ENST00000269137 PLA1AQ53H76 456 aa12□□□□□ -0.49
SS18-201ENST00000269137 SIGIRRQ6IA17 410 aa12□□□□□ -0.49
SS18-201ENST00000269137 AKAP14Q86UN6 197 aa12□□□□□ -0.49
SS18-201ENST00000269137 LRP11Q86VZ4 500 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms