RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SERPINE3A8MV23 424 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 CYB5AP00167 134 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 CRYAAP02489 173 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 CD3DP04234 171 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 NAT1P18440 290 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 NPBWR2P48146 333 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 GNG2P59768 71 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 IL24Q13007 206 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 DAZAP2Q15038 168 aaPredicted RBP13.97□□□□□ -0.17
TPM1-201ENST00000267996 TAF9Q16594 264 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 NHLRC3Q5JS37 347 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 SFRP4Q6FHJ7 346 aaPredicted RBP13.97□□□□□ -0.17
TPM1-201ENST00000267996 OCSTAMPQ9BR26 566 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 RTL8AQ9BWD3 113 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 MTCH1Q9NZJ7 389 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 CADP27708 2225 aa13.97□□□□□ -0.17
TPM1-201ENST00000267996 GABRR1P24046 479 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 CHATP28329 748 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 RBM11P57052 281 aaKnown RBP13.96□□□□□ -0.17
TPM1-201ENST00000267996 TATDN3Q17R31 274 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 PIGYQ3MUY2 71 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 FAAP20Q6NZ36 180 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 WDR86Q86TI4 376 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 OR4D10Q8NGI6 311 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 CYYR1Q96J86 154 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 ADAT1Q9BUB4 502 aaKnown RBP13.96□□□□□ -0.17
TPM1-201ENST00000267996 TMEM100Q9NV29 134 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 NUDT15Q9NV35 164 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 SPEF1Q9Y4P9 236 aa13.96□□□□□ -0.17
TPM1-201ENST00000267996 LRP5LA4QPB2 252 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A10PA6NDY2 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A18PA6NE21 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A16PA6NEW6 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A20PA6NIJ5 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A8PA6NJQ4 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A7PA6NKC0 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A22PA8MWA6 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A12PA8MX19 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A5PA8MXJ8 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A23PA8MXZ1 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 ZNF736B4DX44 427 aaPredicted RBP13.95□□□□□ -0.18
TPM1-201ENST00000267996 PRSS44E7EML9 344 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 J3QT63 122 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A15PP0C7V4 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A13PP0C7W8 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A14PP0C7W9 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FAM90A24PP0C7X0 464 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 ZNF250P15622 560 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 BCL3P20749 454 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 GCH1P30793 250 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 GLRXP35754 106 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 CBX5P45973 191 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FGF12P61328 243 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 MSMPQ1L6U9 139 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 RGS7BPQ6MZT1 257 aaPredicted RBP13.95□□□□□ -0.18
TPM1-201ENST00000267996 HAGHLQ6PII5 290 aaPredicted RBP13.95□□□□□ -0.18
TPM1-201ENST00000267996 ZNF554Q86TJ5 538 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 GVQW1Q8N7I0 195 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 OR8S1Q8NH09 359 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 OR56B4Q8NH76 319 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 SLAMF9Q96A28 289 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 MCUBQ9NWR8 336 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 OSGIN2Q9Y236 505 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 ST3GAL6Q9Y274 331 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 ESPL1Q14674 2120 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 TMEM210A6NLX4 147 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 F8VVB4 439 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 F8VWA3 439 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 GEMIN2O14893 280 aaKnown RBP13.95□□□□□ -0.18
TPM1-201ENST00000267996 SYNGR1O43759 233 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 RAB3DO95716 219 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 THBDP07204 575 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 H2AFB2P0C5Z0 115 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 TBPP20226 339 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 CD40P25942 277 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 HLA-DMAP28067 261 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 FABP6P51161 128 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 CARTPTQ16568 116 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 ALKBH2Q6NS38 261 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 C6orf201Q7Z4U5 140 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 RHOFQ9HBH0 211 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 ALG5Q9Y673 324 aa13.95□□□□□ -0.18
TPM1-201ENST00000267996 TRAV6A0A075B6T7 132 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 MLNRO43193 412 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 TIMM8AO60220 97 aaPredicted RBP13.94□□□□□ -0.18
TPM1-201ENST00000267996 NDUFB6O95139 128 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 DHFRP00374 187 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 FCER2P06734 321 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 ZNF735P0CB33 412 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 TRAPPC2P0DI81 140 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 TRAPPC2BP0DI82 140 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 PPP3CBP16298 524 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 PMELP40967 661 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 ARFRP1Q13795 201 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 OR8G1Q15617 311 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 FBXL19-AS1Q494R0 122 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 Q6ZR03 302 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 OR4S1Q8NGB4 309 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 OR10AD1Q8NGE0 317 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms