RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PRR18Q8N4B5 295 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 OR10J5Q8NHC4 309 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 M1APQ8TC57 530 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 ATG101Q9BSB4 218 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 PLA2G2FQ9BZM2 168 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 GPR84Q9NQS5 396 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 MMACHCQ9Y4U1 282 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 PHF3Q92576 2039 aaKnown RBP13.15□□□□□ -0.31
XRCC1-201ENST00000262887 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.31
XRCC1-201ENST00000262887 COL9A1P20849 921 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 NTSR1P30989 418 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF429Q86V71 674 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 SHDQ96IW2 340 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 EMC6Q9BV81 110 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 PECRQ9BY49 303 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 MOB1AQ9H8S9 216 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 A8MWP6 167 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 TRGC1P0CF51 173 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 GIMD1P0DJR0 217 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 HAGHQ16775 308 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 OR8B12Q8NGG6 310 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 OR14K1Q8NGZ2 314 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 OR5R1Q8NH85 324 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 TSLPQ969D9 159 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 SLCO1B1Q9Y6L6 691 aa13.14□□□□□ -0.31
XRCC1-201ENST00000262887 IGKV1D-8A0A087WSZ0 117 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 NSG1A0A0A6YYJ2 146 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 TNFP01375 233 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
XRCC1-201ENST00000262887 HOXB2P14652 356 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 RGS19P49795 217 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 RND3P61587 244 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
XRCC1-201ENST00000262887 HSF1Q00613 529 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 TMEM31Q5JXX7 168 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
XRCC1-201ENST00000262887 Q6ZSR6 202 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 PACRGQ96M98 296 aaPredicted RBP13.13□□□□□ -0.31
XRCC1-201ENST00000262887 NDUFAF3Q9BU61 184 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
XRCC1-201ENST00000262887 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 TMEM150CB9EJG8 249 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 TSPAN2O60636 221 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 IGKV3-11P04433 115 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 MYOGP15173 224 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 GLIPR1P48060 266 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 TLE3Q04726 772 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 SP6Q3SY56 376 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 AKR1C8PQ5T2L2 129 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 BEND2Q8NDZ0 799 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF721Q8TF20 911 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 CERS4Q9HA82 394 aa13.13□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
XRCC1-201ENST00000262887 IL13RA2Q14627 380 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 H1FNTQ75WM6 255 aaPredicted RBP13.12□□□□□ -0.31
XRCC1-201ENST00000262887 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 FRZBQ92765 325 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 OPN3Q9H1Y3 402 aaPredicted RBP13.12□□□□□ -0.31
XRCC1-201ENST00000262887 SMCO3A2RU48 225 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 DHRS7CA6NNS2 312 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 DDAH2O95865 285 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF17P17021 662 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 IL2RGP31785 369 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 BIDP55957 195 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 PIGPP57054 158 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 ZP4Q12836 540 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 C1QL2Q7Z5L3 287 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 NOL4LQ96MY1 436 aaPredicted RBP13.12□□□□□ -0.31
XRCC1-201ENST00000262887 NIPSNAP3BQ9BS92 247 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 ZNF319Q9P2F9 582 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 IGKV1-9A0A0C4DH69 117 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 FOXI3A8MTJ6 420 aaPredicted RBP13.12□□□□□ -0.31
XRCC1-201ENST00000262887 C1orf53Q5VUE5 145 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 SPSB3Q6PJ21 355 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 OR8G5Q8NG78 346 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 OR2AJ1Q8NGZ0 328 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 SLC25A31Q9H0C2 315 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 LANCL2Q9NS86 450 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 KIAA1456Q9P272 454 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
XRCC1-201ENST00000262887 RRP8O43159 456 aaKnown RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 OR5AC1P0C628 307 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 OR5H8P0DN80 308 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ANOS1P23352 680 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-201ENST00000262887 ASCL1P50553 236 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 DCAF7P61962 342 aa13.11□□□□□ -0.31
XRCC1-201ENST00000262887 TFF2Q03403 129 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms