RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CST9Q5W186 159 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 FPR2P25090 351 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 TOMM34Q15785 309 aaPredicted RBP12.76□□□□□ -0.37
CUX2-201ENST00000261726 GGNBP1Q5YKI7 109 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 OR4D10Q8NGI6 311 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 LRRC29Q8WV35 223 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 RHNO1Q9BSD3 238 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 SLC45A2Q9UMX9 530 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 TMEM272A0A1B0GTI8 110 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 IGHA1P01876 353 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 IGHA2P01877 340 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 ACAA2P42765 397 aaKnown RBP12.76□□□□□ -0.37
CUX2-201ENST00000261726 PGFP49763 221 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 PRRX1P54821 245 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 IGFBP7Q16270 282 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 TRAV20A0A0B4J274 112 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.76□□□□□ -0.37
CUX2-201ENST00000261726 MGPP08493 103 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 SULT1A2P50226 295 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 Q8IYB0 196 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 ACTL6AO96019 429 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 OR4A8P0C604 315 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 ERVS71-1P61550 626 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 PPP1CAP62136 330 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 TMEM241Q24JQ0 296 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 MRGPRDQ8TDS7 321 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 ZNF71Q9NQZ8 489 aaPredicted RBP12.76□□□□□ -0.37
CUX2-201ENST00000261726 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 TMEM183BQ1AE95 376 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 SCGB1D4Q6XE38 83 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 OR1L3Q8NH93 324 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 LRRC61Q9BV99 259 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 SLC26A1Q9H2B4 701 aa12.76□□□□□ -0.37
CUX2-201ENST00000261726 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
CUX2-201ENST00000261726 PCDHGA9Q9Y5G4 932 aaKnown RBP12.76□□□□□ -0.37
CUX2-201ENST00000261726 C3orf85A0A1B0GTC6 90 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 A0A1W2PN81 502 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 TCRBV5S2A0A599 114 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 SPEM2Q0P670 501 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 ZNF774Q6NX45 483 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 C5orf17Q8NAS9 161 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 MAFAQ8NHW3 353 aaPredicted RBP12.75□□□□□ -0.37
CUX2-201ENST00000261726 OTOSQ8NHW6 89 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 PP6455Q8WZ26 134 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 PRRX2Q99811 253 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 VN1R1Q9GZP7 353 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
CUX2-201ENST00000261726 PCOLCE2Q9UKZ9 415 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 HELTA6NFD8 242 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 HYAL3O43820 417 aaPredicted RBP12.75□□□□□ -0.37
CUX2-201ENST00000261726 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
CUX2-201ENST00000261726 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 SPNS1Q9H2V7 528 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 CEACAM5P06731 702 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 MMP15P51511 669 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 FAM53BQ14153 422 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 KISS1Q15726 138 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 YIPF6Q96EC8 236 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 MS4A10Q96PG2 267 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 RSRP1Q9BUV0 290 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 SRD5A3Q9H8P0 318 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 MAP1LC3B2A6NCE7 125 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 M0R2Z0 102 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 RER1O15258 196 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 C6orf201Q7Z4U5 140 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 HSD17B13Q7Z5P4 300 aaPredicted RBP12.75□□□□□ -0.37
CUX2-201ENST00000261726 TM4SF19Q96DZ7 209 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 MAP1LC3BQ9GZQ8 125 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 CACNG5Q9UF02 275 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 POMT2Q9UKY4 750 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 DHRS13Q6UX07 377 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 CLRN3Q8NCR9 226 aa12.75□□□□□ -0.37
CUX2-201ENST00000261726 NEIL1Q96FI4 390 aaPredicted RBP12.75□□□□□ -0.37
CUX2-201ENST00000261726 TRAV1-2A0A0B4J238 106 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 RTP5Q14D33 572 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 OR52L2PQ8NGH6 319 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 OR5A2Q8NGI9 324 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 CNRIP1Q96F85 164 aaPredicted RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 DOK1Q99704 481 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 AUP1Q9Y679 476 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 SLC17A2O00624 439 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 RHBDL1O75783 438 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 BCL2L10Q9HD36 194 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 TMEM140Q9NV12 185 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 WNT1P04628 370 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 ETV3LQ6ZN32 361 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
CUX2-201ENST00000261726 DEFB124Q8NES8 71 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 FGF14Q92915 247 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
CUX2-201ENST00000261726 CROCCQ5TZA2 2017 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms