RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 FBXO34Q9NWN3 711 aa11.13□□□□□ -0.63
FOXN3-201ENST00000261302 MRPS2Q9Y399 296 aaKnown RBP11.13□□□□□ -0.63
FOXN3-201ENST00000261302 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
FOXN3-201ENST00000261302 LOC102723971A0A1B0GUV8 181 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 FAM230AA0A1W2PPH8 454 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 CTSVO60911 334 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 ZNF43P17038 809 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 PSMB5P28074 263 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 PTGER4P35408 488 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 ACAA2P42765 397 aaKnown RBP11.12□□□□□ -0.63
FOXN3-201ENST00000261302 NFATC4Q14934 902 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 FCRL6Q6DN72 434 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 KMT5CQ86Y97 462 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 OR2D3Q8NGH3 330 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 OR5AR1Q8NGP9 310 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 OR2I1PQ8NGU4 316 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 SLC22A12Q96S37 553 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 PLA2G2FQ9BZM2 168 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 GPR84Q9NQS5 396 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 B3GALT5Q9Y2C3 310 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 NDUFS8O00217 210 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 ERI3O43414 337 aaKnown RBP11.12□□□□□ -0.63
FOXN3-201ENST00000261302 AHSA1O95433 338 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 PNPP00491 289 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 IGHEP01854 428 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 SRFP11831 508 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 WNT5AP41221 380 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
FOXN3-201ENST00000261302 GNB2P62879 340 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 IL24Q13007 206 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 OR2AJ1Q8NGZ0 328 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 ZNF700Q9H0M5 742 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 APOBEC3BQ9UH17 382 aaKnown RBP11.12□□□□□ -0.63
FOXN3-201ENST00000261302 RNF150Q9ULK6 438 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 LAMP3Q9UQV4 416 aa11.12□□□□□ -0.63
FOXN3-201ENST00000261302 CXorf51AA0A1B0GTR3 108 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 CBY3A6NI87 242 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 SCDO00767 359 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 KNG1P01042 644 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 VIPR2P41587 438 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 RPS27P42677 84 aaKnown RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 MFGE8Q08431 387 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 GPR18Q14330 331 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 LRRC69Q6ZNQ3 347 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 ZFP62Q8NB50 900 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 OR5T1Q8NG75 326 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 OR5H2Q8NGV7 314 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 OTOSQ8NHW6 89 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 PTPMT1Q8WUK0 201 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 SDSLQ96GA7 329 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 SCARF2Q96GP6 870 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 MS4A10Q96PG2 267 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 NRTNQ99748 197 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 SRA1Q9HD15 236 aaKnown RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 RPH3ALQ9UNE2 315 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 NSG1A0A0A6YYJ2 146 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 A0A1W2PPV9 198 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 IFNL4K9M1U5 179 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 BPNT1O95861 308 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 HBE1P02100 147 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 CD70P32970 193 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 PPP1R14AQ96A00 147 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 MRPL24Q96A35 216 aaKnown RBP11.11□□□□□ -0.63
FOXN3-201ENST00000261302 CCDC74BQ96LY2 380 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 WWTR1Q9GZV5 400 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 CLEC4EQ9ULY5 219 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 HS3ST2Q9Y278 367 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 MUC3AQ02505 3323 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 COL4A2P08572 1712 aa11.11□□□□□ -0.63
FOXN3-201ENST00000261302 OR2J2O76002 312 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 CSNK1A1P48729 337 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 DNASE1L1P49184 302 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 DCAF7P61962 342 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 CDK3Q00526 305 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 RUNX2Q13950 521 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 ENDOGQ14249 297 aaKnown RBP11.1□□□□□ -0.63
FOXN3-201ENST00000261302 IL13RA2Q14627 380 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 MEP1BQ16820 701 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 LRRC25Q8N386 305 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-201ENST00000261302 Q8NFD4 153 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 TMEM37Q8WXS4 190 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 LINC00615Q96LM1 132 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-201ENST00000261302 CD55P08174 381 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 VSIG8P0DPA2 414 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 GZMHP20718 246 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 ZNF266Q14584 549 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 RTN4RL2Q86UN3 420 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 STPG4Q8N801 248 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 ZNF321PQ8N8H1 164 aa11.1□□□□□ -0.63
FOXN3-201ENST00000261302 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms