RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 A0A075B6Q4 140 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 CDC14BO60729 498 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 ZNF780AO75290 641 aaPredicted RBP13.18□□□□□ -0.3
GYPC-201ENST00000259254 PTBP3O95758 552 aaKnown RBP13.18□□□□□ -0.3
GYPC-201ENST00000259254 MPIG6BO95866 241 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 VSIG8P0DPA2 414 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 BCL3P20749 454 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
GYPC-201ENST00000259254 GPR176Q14439 515 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 WDR82Q6UXN9 313 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 C11orf53Q8IXP5 236 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 KCNG3Q8TAE7 436 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 LRRC29Q8WV35 223 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 HPS1Q92902 700 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 ERGIC1Q969X5 290 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 BANF2Q9H503 90 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
GYPC-201ENST00000259254 TMEM272A0A1B0GTI8 110 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 LRRC30A6NM36 301 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 FAM25AB3EWG3 89 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 FAM25CB3EWG5 89 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 FAM25GB3EWG6 89 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 H7C417 338 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 CTDSP2O14595 271 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 AKR7A2O43488 359 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 HPGDSO60760 199 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 CLPXO76031 633 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 NXPH2O95156 264 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 HPXP02790 462 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 S100A5P33763 92 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 GATA4P43694 442 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 NPBWR2P48146 333 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 BMXP51813 675 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 SNU13P55769 128 aaKnown RBP13.17□□□□□ -0.3
GYPC-201ENST00000259254 SCAND1P57086 179 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 ASCL4Q6XD76 172 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 OR2W3Q7Z3T1 314 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 NEU4Q8WWR8 484 aaPredicted RBP13.17□□□□□ -0.3
GYPC-201ENST00000259254 EMG1Q92979 244 aaKnown RBP13.17□□□□□ -0.3
GYPC-201ENST00000259254 NXF2Q9GZY0 626 aaKnown RBP13.17□□□□□ -0.3
GYPC-201ENST00000259254 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
GYPC-201ENST00000259254 GCM1Q9NP62 436 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 RBFOX1Q9NWB1 397 aaKnown RBP13.17□□□□□ -0.3
GYPC-201ENST00000259254 ADAM30Q9UKF2 790 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 PEX16Q9Y5Y5 336 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 A3GALT2U3KPV4 340 aa13.17□□□□□ -0.3
GYPC-201ENST00000259254 TACC2O95359 2948 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 IGHV1-69-2A0A0G2JMI3 117 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 A0A1W2PP11 408 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 SFTPBP07988 381 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 GTF2F2P13984 249 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 MGMTP16455 207 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 PMELP40967 661 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 EFNB2P52799 333 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 ART1P52961 327 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 PLA2G7Q13093 441 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 Q8IYB0 196 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 OSR2Q8N2R0 312 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 OR10Z1Q8NGY1 313 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 CCL17Q92583 94 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 PHF21AQ96BD5 680 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
GYPC-201ENST00000259254 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 SELENOIQ9C0D9 397 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 ATG5Q9H1Y0 275 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 CXorf56Q9H5V9 222 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 RHBDL2Q9NX52 303 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 IL36GQ9NZH8 169 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 RNF7Q9UBF6 113 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
GYPC-201ENST00000259254 TMEM14DPA8MWL7 114 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 F8VVB4 439 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 F8VWA3 439 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 CYB5R3P00387 301 aaPredicted RBP13.15□□□□□ -0.3
GYPC-201ENST00000259254 PRKACAP17612 351 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 GLRA1P23415 457 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 CD80P33681 288 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 RBMXP38159 391 aaKnown RBP13.15□□□□□ -0.3
GYPC-201ENST00000259254 UNC119Q13432 240 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 HFEQ30201 348 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
GYPC-201ENST00000259254 LAX1Q8IWV1 398 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 FAM58AQ8N1B3 248 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 Q8TCH9 128 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 NRGNQ92686 78 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 NRIP2Q9BQI9 281 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 URM1Q9BTM9 101 aaKnown RBP13.15□□□□□ -0.3
GYPC-201ENST00000259254 TMEM106BQ9NUM4 274 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
GYPC-201ENST00000259254 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
GYPC-201ENST00000259254 IFNL4K9M1U5 179 aa13.14□□□□□ -0.31
GYPC-201ENST00000259254 WNT9BO14905 357 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms