RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TFAP2AP05549 437 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 IL7P13232 177 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 HTR2BP41595 481 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 SORDQ00796 357 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF616Q08AN1 781 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 COL9A2Q14055 689 aaPredicted RBP11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 CTHRC1Q96CG8 243 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 RER1O15258 196 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 DNASE2O00115 360 aaPredicted RBP11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 COX7A1P24310 79 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 OR3A4PP47883 348 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 PMP22Q01453 160 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 SMAGPQ0VAQ4 97 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 CCDC71Q8IV32 467 aaPredicted RBP11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 PDZD9Q8IXQ8 264 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 FYTTD1Q96QD9 318 aaKnown RBP11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 BANF2Q9H503 90 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 NARFLQ9H6Q4 476 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 PROB1E7EW31 1015 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 ADRB1P08588 477 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 MUC1P15941 1255 aaPredicted RBP11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 MRPS11P82912 194 aaKnown RBP11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 HIKESHIQ53FT3 197 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 PRNDQ9UKY0 176 aa11.78□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.52
PRPF38A-201ENST00000257181 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.52
PRPF38A-201ENST00000257181 M0QZK8 103 aa11.77□□□□□ -0.52
PRPF38A-201ENST00000257181 CHATP28329 748 aa11.77□□□□□ -0.52
PRPF38A-201ENST00000257181 CD83Q01151 205 aa11.77□□□□□ -0.52
PRPF38A-201ENST00000257181 OR10V1Q8NGI7 309 aa11.77□□□□□ -0.52
PRPF38A-201ENST00000257181 EPHA2P29317 976 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 TSPO2Q5TGU0 170 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 MAP6Q96JE9 813 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 HSD17B10Q99714 261 aaKnown RBP11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 TMEM147Q9BVK8 224 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 DPCDQ9BVM2 203 aaPredicted RBP11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 AAMDCQ9H7C9 122 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF225Q9UK10 706 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 INSIG2Q9Y5U4 225 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 LOC105371242A0A075B767 164 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 IGLV3-32A0A0A0MS00 114 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 IGKV1-8A0A0C4DH67 115 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 SULT1A3P0DMM9 295 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 SULT1A4P0DMN0 295 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC25A16P16260 332 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 CD200P41217 278 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 C10orf128Q5T292 105 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 LYG1Q8N1E2 194 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF561Q8N587 486 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC25A46Q96AG3 418 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 PATJQ8NI35 1801 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 TANC1Q9C0D5 1861 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 PGA3P0DJD8 388 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 TAF9Q16594 264 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 PRSS33Q8NF86 280 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 C7orf34Q96L11 122 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 PTPRFP10586 1907 aa11.77□□□□□ -0.53
PRPF38A-201ENST00000257181 MMP16P51512 607 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 HTD2P86397 168 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 SURF2Q15527 256 aaPredicted RBP11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 ZFAND2BQ8WV99 257 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 PMP2P02689 132 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 ALOX5APP20292 161 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 NPBWR1P48145 328 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 C15orf54Q8N8G6 183 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 TMEM54Q969K7 222 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 NPAP1Q9NZP6 1156 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 A0A1W2PR80 420 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 A0A1W2PS18 150 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 S100A8P05109 93 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 HOXB5P09067 269 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 OR2B8PP59922 312 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 CEACAM21Q3KPI0 293 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 CALHM1Q8IU99 346 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 TIMM9Q9Y5J7 89 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 XRCC3O43542 346 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 PTP4A3O75365 173 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 ACKR3P25106 362 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 S100A2P29034 98 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 BTG1P62324 171 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 TIAL1Q01085 375 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 C16orf47Q6ZP98 133 aaPredicted RBP11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 FADS6Q8N9I5 356 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 PDCD1LG2Q9BQ51 273 aa11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
PRPF38A-201ENST00000257181 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms