RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CALHM1Q8IU99 346 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 OR8H3Q8N146 312 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 BATF2Q8N1L9 274 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 C17orf78Q8N4C9 275 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 SPICQ8N5J4 248 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 HPSE2Q8WWQ2 592 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 S100PBPQ96BU1 408 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 MED30Q96HR3 178 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 GHRLQ9UBU3 117 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 IGKV1-12A0A0C4DH73 117 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 HTR3BO95264 441 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 IGKV1D-12P01611 117 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 LPLP06858 475 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 CECR9P0C854 216 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 RPS27AP62979 156 aaKnown RBP16.22■□□□□ 0.19
TRIM47-201ENST00000254816 OR1J1Q8NGS3 322 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 SLC25A40Q8TBP6 338 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 PCNPQ8WW12 178 aaKnown RBP16.22■□□□□ 0.19
TRIM47-201ENST00000254816 CHST6Q9GZX3 395 aa16.22■□□□□ 0.19
TRIM47-201ENST00000254816 SNRPGP15A8MWD9 76 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 CST4P01036 141 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 GPM6AP51674 278 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 UCP2P55851 309 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 TMEM50BP56557 158 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 ZDHHC23Q8IYP9 409 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 CSNK2A3Q8NEV1 391 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 NUDCD2Q8WVJ2 157 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 URM1Q9BTM9 101 aaKnown RBP16.21■□□□□ 0.19
TRIM47-201ENST00000254816 TINAGL1Q9GZM7 467 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-201ENST00000254816 OPA3Q9H6K4 179 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 SLC25A15Q9Y619 301 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 IGHV1-18A0A0C4DH31 117 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 NOS1APO75052 506 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-201ENST00000254816 SLC22A5O76082 557 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 ACTBP60709 375 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 ACTG1P63261 375 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 RSU1Q15404 277 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 FJX1Q86VR8 437 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 CPNE2Q96FN4 548 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-201ENST00000254816 TECTBQ96PL2 329 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 METTL9Q9H1A3 318 aa16.21■□□□□ 0.19
TRIM47-201ENST00000254816 CHRM2P08172 466 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 FAM27E3Q08E93 113 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 PDZK1IP1Q13113 114 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 MUC20Q8N307 709 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-201ENST00000254816 RAB3CQ96E17 227 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 ARHGAP5-AS1Q96IT6 56 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 KCNK7Q9Y2U2 307 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 A8MXE2 369 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 RAB3DO95716 219 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 GIPP09681 153 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-201ENST00000254816 ZNF35P13682 527 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 GRK1Q15835 563 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 CEACAM21Q3KPI0 293 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 ALKBH6Q3KRA9 238 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 PCNX1Q96RV3 2341 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 AMDHD2Q9Y303 409 aa16.2■□□□□ 0.18
TRIM47-201ENST00000254816 PQLC2LA1A4F0 135 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 UBE2QL1A1L167 161 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 ANKRD30BLA7E2S9 258 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 ZNF732B4DXR9 585 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 SULT1C2O00338 296 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 SCGNO76038 276 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 CFDP00746 253 aaPredicted RBP16.19■□□□□ 0.18
TRIM47-201ENST00000254816 IGLV1-44P01699 117 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 CSTBP04080 98 aaKnown RBP16.19■□□□□ 0.18
TRIM47-201ENST00000254816 CA6P23280 308 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 GABRR1P24046 479 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 OPRM1P35372 400 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 H2BFSP57053 126 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 TAS2R19P59542 299 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 KLRB1Q12918 225 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 EXOSC2Q13868 293 aaKnown RBP16.19■□□□□ 0.18
TRIM47-201ENST00000254816 FBXW12Q6X9E4 464 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 TRAPPC6BQ86SZ2 158 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 FAM89BQ8N5H3 189 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 GVQW1Q8N7I0 195 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 ZNF611Q8N823 705 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 OR56B1Q8NGI3 324 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 CLEC4MQ9H2X3 399 aaPredicted RBP16.19■□□□□ 0.18
TRIM47-201ENST00000254816 SCPEP1Q9HB40 452 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 ZNF581Q9P0T4 197 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 GOSR2O14653 212 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 MSTNO14793 375 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 CSN2P05814 226 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 SFTPBP07988 381 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 CALCRP30988 508 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 MPV17P39210 176 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 OR3A3P47888 321 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 ZNF83P51522 516 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 C4orf46Q504U0 113 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 IDO2Q6ZQW0 420 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 SLC25A26Q70HW3 274 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 OR4S1Q8NGB4 309 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 OR51F2Q8NH61 342 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 ELMOD3Q96FG2 381 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 OBP2BQ9NPH6 170 aa16.19■□□□□ 0.18
TRIM47-201ENST00000254816 AMY2AP04746 511 aa16.18■□□□□ 0.18
TRIM47-201ENST00000254816 HIST1H1DP16402 221 aaKnown RBP16.18■□□□□ 0.18
TRIM47-201ENST00000254816 CXCL2P19875 107 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms