RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PECRQ9BY49 303 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 NKIRAS2Q9NYR9 191 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 INMT-MINDY4F8WBC2 141 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 TRAPPC2LH3BP13 241 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 J3QT63 122 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 PLATP00750 562 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 MT-ND4P03905 459 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ACAA1P09110 424 aaPredicted RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 TRAPPC2P0DI81 140 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 TRAPPC2BP0DI82 140 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ZNF250P15622 560 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 NAT1P18440 290 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 PTAFRP25105 342 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 GIFP27352 417 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 CHRNB4P30926 498 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 MPV17P39210 176 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 FGF12P61328 243 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 LY6DQ14210 128 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 MEF2DQ14814 521 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ZMYND11Q15326 602 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 AGAP6Q5VW22 663 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 RSBN1Q5VWQ0 802 aaPredicted RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 STEAP1BQ6NZ63 245 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 NCCRP1Q6ZVX7 275 aaPredicted RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 Q8IYB0 196 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 OR51I2Q9H344 312 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 POLDIP2Q9Y2S7 368 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 KCNK7Q9Y2U2 307 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 TIMM8AO60220 97 aaPredicted RBP12.12□□□□□ -0.47
SDF2-201ENST00000247020 DHFRP00374 187 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 SFTPBP07988 381 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 OR8G1Q15617 311 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 MPV17LQ2QL34 196 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 OR4C16Q8NGL9 310 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 OR56B4Q8NH76 319 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 NGBQ9NPG2 151 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 PLEKHJ1Q9NW61 149 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 COQ3Q9NZJ6 369 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 ST3GAL6Q9Y274 331 aa12.12□□□□□ -0.47
SDF2-201ENST00000247020 ZNF736B4DX44 427 aaPredicted RBP12.11□□□□□ -0.47
SDF2-201ENST00000247020 CCL21O00585 134 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 SSX5O60225 188 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 GABRR1P24046 479 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 CD40P25942 277 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 HLA-DMAP28067 261 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 CHATP28329 748 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 ARFRP1Q13795 201 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 IL13RA2Q14627 380 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 TMEM255AQ5JRV8 349 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 PCSK4Q6UW60 755 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 LRRC46Q96FV0 321 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 ELF5Q9UKW6 265 aaPredicted RBP12.11□□□□□ -0.47
SDF2-201ENST00000247020 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
SDF2-201ENST00000247020 IGLV3-9A0A075B6K5 115 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 PDCD6O75340 191 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 RAB3DO95716 219 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 CD3DP04234 171 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 BCL3P20749 454 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 RBMS2Q15434 407 aaKnown RBP12.1□□□□□ -0.47
SDF2-201ENST00000247020 TAF9Q16594 264 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 TATDN3Q17R31 274 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 SIGIRRQ6IA17 410 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
SDF2-201ENST00000247020 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 GLCCI1Q86VQ1 547 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 DVL3Q92997 716 aaPredicted RBP12.1□□□□□ -0.47
SDF2-201ENST00000247020 SLAMF9Q96A28 289 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 NEURL2Q9BR09 285 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 NUDT15Q9NV35 164 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 MCUBQ9NWR8 336 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 SLC2A8Q9NY64 477 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
SDF2-201ENST00000247020 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 MLNRO43193 412 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 PRAF2O60831 178 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 NDUFB6O95139 128 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 H2AFB2P0C5Z0 115 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 FUT3P21217 361 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 NPBWR2P48146 333 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 FABP6P51161 128 aa12.09□□□□□ -0.47
SDF2-201ENST00000247020 MECP2P51608 486 aaKnown RBP12.09□□□□□ -0.47
SDF2-201ENST00000247020 CCR6P51684 374 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms