RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 MEMO1Q9Y316 297 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 A0A0G2JMM0 328 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 A0A1W2PPB8 328 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 A0A1W2PRS3 328 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 KIR3DP1A8MWS1 328 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 RRP8O43159 456 aaKnown RBP12.52□□□□□ -0.41
HIF3A-202ENST00000244303 PATE4P0C8F1 98 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 RRADP55042 308 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 RSU1Q15404 277 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
HIF3A-202ENST00000244303 MST1LQ2TV78 715 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.41
HIF3A-202ENST00000244303 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 ADAMTS17Q8TE56 1095 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 SPSB1Q96BD6 273 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 TMEM231Q9H6L2 316 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 IFT22Q9H7X7 185 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 MMP26Q9NRE1 261 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 AK3Q9UIJ7 227 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 ANXA10Q9UJ72 324 aa12.52□□□□□ -0.41
HIF3A-202ENST00000244303 CCDC187A0A096LP49 1063 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 SNAPINO95295 136 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 HKR1P10072 659 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 ECI1P42126 302 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 RAC3P60763 192 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 ALKBH3Q96Q83 286 aaPredicted RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 LIME1Q9H400 295 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 LPAR3Q9UBY5 353 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 GJE1A6NN92 205 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 B4E171 279 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 LCATP04180 440 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 CTSDP07339 412 aaPredicted RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 B4GALT1P15291 398 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 ZNF708P17019 499 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 RCC1P18754 421 aaPredicted RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 ACP1P24666 158 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 TSPAN7P41732 249 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 RGS19P49795 217 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 TCEAL6Q6IPX3 200 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 TMEM105Q8N8V8 129 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 NAXEQ8NCW5 288 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 OR1F12Q8NHA8 337 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 AKR7LQ8NHP1 331 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 TCEAL3Q969E4 200 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
HIF3A-202ENST00000244303 TMEM38BQ9NVV0 291 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 PADI1Q9ULC6 663 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 TECTAO75443 2155 aa12.51□□□□□ -0.41
HIF3A-202ENST00000244303 CRYM-AS1A6NIL9 109 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 NUDT19A8MXV4 375 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 CST2P09228 141 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 ZNF32P17041 273 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 OPRM1P35372 400 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 SPEM2Q0P670 501 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
HIF3A-202ENST00000244303 OR2A2Q6IF42 318 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 OR14L1PQ8NHC6 308 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 FNDC9Q8TBE3 224 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 DYRK2Q92630 601 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 CNTNAP3Q9BZ76 1288 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 TLNRD1Q9H1K6 362 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 TAF9BQ9HBM6 251 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 ZNF205O95201 554 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 RFC3P40938 356 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 RBP2P50120 134 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 CARD18P57730 90 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 C10orf91Q5T1B1 145 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 DHRS7BQ6IAN0 325 aaPredicted RBP12.5□□□□□ -0.41
HIF3A-202ENST00000244303 GGNQ86UU5 652 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 C2CD4CQ8TF44 421 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 MRPL24Q96A35 216 aaKnown RBP12.5□□□□□ -0.41
HIF3A-202ENST00000244303 BORCS8Q96FH0 119 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 CMSS1Q9BQ75 279 aaKnown RBP12.5□□□□□ -0.41
HIF3A-202ENST00000244303 SULT4A1Q9BR01 284 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 DECR2Q9NUI1 292 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 EDARQ9UNE0 448 aa12.5□□□□□ -0.41
HIF3A-202ENST00000244303 ZNF716A6NP11 495 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 ZNF850A8MQ14 1090 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 DNPH1O43598 174 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 LRP3O75074 770 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 SRD5A2P31213 254 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 HTR5AP47898 357 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 DCAF12Q5T6F0 453 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 GGNBP1Q5YKI7 109 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 BRICD5Q6PL45 260 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 IL34Q6ZMJ4 242 aa12.49□□□□□ -0.41
HIF3A-202ENST00000244303 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
HIF3A-202ENST00000244303 TOMM40LQ969M1 308 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms