RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CSNK2A1P68400 391 aaPredicted RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 HIST1H3AP68431 136 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 CYCSP99999 105 aaKnown RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 CFHR3Q02985 330 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 MFAP5Q13361 173 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PPP1R1AQ13522 171 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 HIST2H3PS2Q5TEC6 136 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 DGAT2L7PQ6IED9 249 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 ACSM6Q6P461 480 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 GLIPR1L1Q6UWM5 242 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 ALKAL2Q6UX46 152 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 ACOT7LQ6ZUV0 252 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 HIST2H3AQ71DI3 136 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 WDR5BQ86VZ2 330 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF101Q8IZC7 436 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF283Q8N7M2 679 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PNLDC1Q8NA58 520 aaKnown RBP6.84□□□□□ -1.32
CXCR4-201ENST00000241393 OR4S1Q8NGB4 309 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PAQR8Q8TEZ7 354 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 NUDCD2Q8WVJ2 157 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 GLMPQ8WWB7 406 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PP6455Q8WZ26 134 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 MRGPRFQ96AM1 343 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 RAB3CQ96E17 227 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PDCD10Q9BUL8 212 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM59Q9BXS4 323 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 PPA2Q9H2U2 334 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 SH2D2AQ9NP31 389 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 KCNK7Q9Y2U2 307 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 FLVCR1Q9Y5Y0 555 aa6.84□□□□□ -1.32
CXCR4-201ENST00000241393 TRIOBPQ9H2D6 2365 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TRBV6-7A0A0A0MS04 114 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 GJE1A6NN92 205 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 C9J4A7 227 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 MFNGO00587 321 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 RER1O15258 196 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 HPP00738 406 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 GP1BAP07359 652 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 CD63P08962 238 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 LIFP15018 202 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 GNB3P16520 340 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 OTX1P32242 354 aaPredicted RBP6.83□□□□□ -1.32
CXCR4-201ENST00000241393 SFTPDP35247 375 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 NUP62P37198 522 aaPredicted RBP6.83□□□□□ -1.32
CXCR4-201ENST00000241393 CLDN17P56750 224 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 HOXA4Q00056 320 aaPredicted RBP6.83□□□□□ -1.32
CXCR4-201ENST00000241393 HLA-BQ31612 363 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM128Q5BJH2 165 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 LCN10Q6JVE6 187 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM88Q6PEY1 159 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 SLC16A14Q7RTX9 510 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM17Q86X19 198 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 COMMD2Q86X83 199 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 GVQW1Q8N7I0 195 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM185AQ8NFB2 350 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 OR4K15Q8NH41 348 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 OR1S1Q8NH92 325 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TERB2Q8NHR7 220 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 COQ8AQ8NI60 647 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 CMBLQ96DG6 245 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 PGAM5Q96HS1 289 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 SF3B5Q9BWJ5 86 aaKnown RBP6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TM2D1Q9BX74 207 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 NMES1Q9C002 83 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM185BQ9H7F4 350 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 OCIAD1Q9NX40 245 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 RASL12Q9NYN1 266 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 MYEF2Q9P2K5 600 aaKnown RBP6.83□□□□□ -1.32
CXCR4-201ENST00000241393 V9GYS6 101 aa6.83□□□□□ -1.32
CXCR4-201ENST00000241393 A0A0A6YYD4 124 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 OR2AT4A6NND4 320 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 FOXI3A8MTJ6 420 aaPredicted RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 SERPINE3A8MV23 424 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 D6RAR5 112 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 H7C1Q1 480 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 NTN3O00634 580 aaPredicted RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 MTRF1O75570 445 aaKnown RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 DHRS3O75911 302 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 IGHEP01854 428 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 DCNP07585 359 aaKnown RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 HCKP08631 526 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 COX6A1P12074 109 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 ABOP16442 354 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 WT1P19544 449 aaPredicted RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 CDAP32320 146 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 SSR4P51571 173 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 TAS2R46P59540 309 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 SURF2Q15527 256 aaPredicted RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 INPP5JQ15735 1006 aaPredicted RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 CARD17Q5XLA6 110 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 OR52W1Q6IF63 320 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 MOB3CQ70IA8 216 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 FAM57BQ71RH2 274 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM123Q8N131 208 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 PXT1Q8NFP0 134 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 OR2Y1Q8NGV0 311 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 THAP6Q8TBB0 222 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 PPP1R1CQ8WVI7 109 aa6.82□□□□□ -1.32
CXCR4-201ENST00000241393 PCNPQ8WW12 178 aaKnown RBP6.82□□□□□ -1.32
CXCR4-201ENST00000241393 FAM71F1Q96KD3 344 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms