RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.34■□□□□ 0.85
RRP9-201ENST00000232888 MEIS3P1A6NDR6 274 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 ZNF736B4DX44 427 aaPredicted RBP20.34■□□□□ 0.85
RRP9-201ENST00000232888 HLA-DMAP28067 261 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 MPV17P39210 176 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 CCR6P51684 374 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 MEF2DQ14814 521 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 TATDN3Q17R31 274 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 FBXL14Q8N1E6 418 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 SPERTQ8NA61 448 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 OR51I2Q9H344 312 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 PLK3Q9H4B4 646 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 NUDT15Q9NV35 164 aa20.34■□□□□ 0.85
RRP9-201ENST00000232888 MAP1BP46821 2468 aaKnown RBP20.33■□□□□ 0.85
RRP9-201ENST00000232888 LRP5LA4QPB2 252 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 TMEM210A6NLX4 147 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 TRAPPC2LH3BP13 241 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 J3QT63 122 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 CD3DP04234 171 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 SFTPBP07988 381 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 NAT1P18440 290 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 PMELP40967 661 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 RBM11P57052 281 aaKnown RBP20.33■□□□□ 0.84
RRP9-201ENST00000232888 SFRP4Q6FHJ7 346 aaPredicted RBP20.33■□□□□ 0.84
RRP9-201ENST00000232888 RGS7BPQ6MZT1 257 aaPredicted RBP20.33■□□□□ 0.84
RRP9-201ENST00000232888 NUDCD2Q8WVJ2 157 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 PLEKHJ1Q9NW61 149 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 NKIRAS2Q9NYR9 191 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 ST3GAL6Q9Y274 331 aa20.33■□□□□ 0.84
RRP9-201ENST00000232888 TLN1Q9Y490 2541 aaKnown RBP20.32■□□□□ 0.84
RRP9-201ENST00000232888 SSX5O60225 188 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 RAB3DO95716 219 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 H2AFB2P0C5Z0 115 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 GABRR1P24046 479 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 CCKARP32238 428 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 GLRXP35754 106 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 FGF12P61328 243 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 RPS23P62266 143 aaKnown RBP20.32■□□□□ 0.84
RRP9-201ENST00000232888 ARFRP1Q13795 201 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 SEZ6L2Q6UXD5 910 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 ZNF782Q6ZMW2 699 aaPredicted RBP20.32■□□□□ 0.84
RRP9-201ENST00000232888 ADAT1Q9BUB4 502 aaKnown RBP20.32■□□□□ 0.84
RRP9-201ENST00000232888 BOD1L1Q8NFC6 3051 aa20.32■□□□□ 0.84
RRP9-201ENST00000232888 A0A1B0GWJ7 208 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 NDUFB6O95139 128 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 MZT1Q08AG7 82 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 OR8G1Q15617 311 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 TAF9Q16594 264 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 ACTBL2Q562R1 376 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 HAGHLQ6PII5 290 aaPredicted RBP20.31■□□□□ 0.84
RRP9-201ENST00000232888 NCCRP1Q6ZVX7 275 aaPredicted RBP20.31■□□□□ 0.84
RRP9-201ENST00000232888 LINC00596Q86U02 117 aa20.31■□□□□ 0.84
RRP9-201ENST00000232888 DVL3Q92997 716 aaPredicted RBP20.31■□□□□ 0.84
RRP9-201ENST00000232888 TIMM8AO60220 97 aaPredicted RBP20.3■□□□□ 0.84
RRP9-201ENST00000232888 ZNF250P15622 560 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 NKX6-1P78426 367 aaPredicted RBP20.3■□□□□ 0.84
RRP9-201ENST00000232888 ZMYND11Q15326 602 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 RBMS2Q15434 407 aaKnown RBP20.3■□□□□ 0.84
RRP9-201ENST00000232888 SLAMF9Q96A28 289 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 MTCH1Q9NZJ7 389 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 PLEKHA6Q9Y2H5 1048 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 POLDIP2Q9Y2S7 368 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 ATMQ13315 3056 aa20.3■□□□□ 0.84
RRP9-201ENST00000232888 A0A0B4J293 547 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 HMX3A6NHT5 357 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 BCL3P20749 454 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 PTAFRP25105 342 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 CHATP28329 748 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 ALKBH6Q3KRA9 238 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 SIGIRRQ6IA17 410 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 TMEM108Q6UXF1 575 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 Q8IYB0 196 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 OR13G1Q8NGZ3 307 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 C20orf85Q9H1P6 137 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 NPDC1Q9NQX5 325 aaPredicted RBP20.29■□□□□ 0.84
RRP9-201ENST00000232888 TRAV6A0A075B6T7 132 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 DISC1C4P0D8 188 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 GEMIN2O14893 280 aaKnown RBP20.29■□□□□ 0.84
RRP9-201ENST00000232888 PRAF2O60831 178 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 PDCD6O75340 191 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 ACAA1P09110 424 aaPredicted RBP20.29■□□□□ 0.84
RRP9-201ENST00000232888 CD40P25942 277 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 NPBWR2P48146 333 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 ASCL1P50553 236 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 FABP6P51161 128 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 LY6DQ14210 128 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 MPV17LQ2QL34 196 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 RNASE10Q5GAN6 216 aaKnown RBP20.29■□□□□ 0.84
RRP9-201ENST00000232888 AKAP14Q86UN6 197 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 CXXC4Q9H2H0 198 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 SCP2D1Q9UJQ7 156 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 OSGIN2Q9Y236 505 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 ALG5Q9Y673 324 aa20.29■□□□□ 0.84
RRP9-201ENST00000232888 CCL21O00585 134 aa20.28■□□□□ 0.84
RRP9-201ENST00000232888 PEX14O75381 377 aa20.28■□□□□ 0.84
RRP9-201ENST00000232888 HNRNPCP07910 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
RRP9-201ENST00000232888 FUT3P21217 361 aa20.28■□□□□ 0.84
RRP9-201ENST00000232888 CHRNB4P30926 498 aa20.28■□□□□ 0.84
RRP9-201ENST00000232888 MECP2P51608 486 aaKnown RBP20.28■□□□□ 0.84
RRP9-201ENST00000232888 PIGYQ3MUY2 71 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms