RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TTRP02766 147 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 HCKP08631 526 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 MAS1LP35410 378 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 CPEB2Q7Z5Q1 589 aaKnown RBP12.37□□□□□ -0.43
SF1-201ENST00000227503 C9orf40Q8IXQ3 194 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 OR51E1Q8TCB6 317 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 HPSE2Q8WWQ2 592 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 TOMM40LQ969M1 308 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 PTX4Q96A99 478 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 PBDC1Q9BVG4 233 aa12.37□□□□□ -0.43
SF1-201ENST00000227503 VPS13AQ96RL7 3174 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 A0A1B0GWJ7 208 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 A8MVM7 634 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 TMEM14DPA8MWL7 114 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 ALG1L2C9J202 215 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 H3BMH7 237 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 BPNT1O95861 308 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 MT-ATP6P00846 226 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 H2BFMP0C1H6 154 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 NUTF2P61970 127 aaKnown RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 VAX1Q5SQQ9 334 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 Q6ZS52 159 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 OR52M1Q8NGK5 317 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 A0A1W2PQD3 144 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 FAM221AA4D161 298 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 TLCD2A6NGC4 264 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 A8MWP6 167 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 CDC14BO60729 498 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 DXOO77932 396 aaKnown RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 PTBP3O95758 552 aaKnown RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 MMP7P09237 267 aaPredicted RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 ZNF823P16415 610 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 IL12BP29460 328 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 UCP2P55851 309 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 HSD11B2P80365 405 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 RSPO4Q2I0M5 234 aaPredicted RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 LYZL2Q7Z4W2 148 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 WFIKKN1Q96NZ8 548 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 GPER1Q99527 375 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 TXNIPQ9H3M7 391 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 RBFOX3A6NFN3 312 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 OR5H8P0DN80 308 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 FUT3P21217 361 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 RNF4P78317 190 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 TLE1Q04724 770 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 CLEC12BQ2HXU8 276 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 C1QL2Q7Z5L3 287 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 KDF1Q8NAX2 398 aaPredicted RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 FAM71F1Q96KD3 344 aaPredicted RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 ZNF2Q9BSG1 426 aaPredicted RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 CHRNA10Q9GZZ6 450 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 C1orf123Q9NWV4 160 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 OR14J1Q9UGF5 321 aa12.36□□□□□ -0.43
SF1-201ENST00000227503 C14orf166Q9Y224 244 aaKnown RBP12.36□□□□□ -0.43
SF1-201ENST00000227503 RPL36A-HNRNPH2H7BZ11 118 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 SEC11BP0C7V7 166 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 GZMBP10144 247 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 GP1BBP13224 206 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 PGCP20142 388 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 TBPP20226 339 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 SUMF1Q8NBK3 374 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 LMX1AQ8TE12 382 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 DAZLQ92904 295 aaKnown RBP12.35□□□□□ -0.43
SF1-201ENST00000227503 MED29Q9NX70 200 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
SF1-201ENST00000227503 PADI1Q9ULC6 663 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 B3GALT1Q9Y5Z6 326 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 PCDH15Q96QU1 1955 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 TMED7-TICAM2A0A0A6YYA0 188 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 BORCS7-ASMTA0A0B4J1R7 106 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 NXPH3O95157 252 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 IL18BPO95998 194 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 MMP9P14780 707 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 PPM1FP49593 454 aaPredicted RBP12.35□□□□□ -0.43
SF1-201ENST00000227503 AFF3P51826 1226 aaKnown RBP12.35□□□□□ -0.43
SF1-201ENST00000227503 DCAF7P61962 342 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 FOXK1P85037 733 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 GLO1Q04760 184 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 C1orf147Q96MC9 270 aaPredicted RBP12.35□□□□□ -0.43
SF1-201ENST00000227503 EMC6Q9BV81 110 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 VN1R1Q9GZP7 353 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 TP53TG5Q9Y2B4 290 aa12.35□□□□□ -0.43
SF1-201ENST00000227503 DHRS7CA6NNS2 312 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 PLPP3O14495 311 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 IGHMP01871 453 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 HSD11B1P28845 292 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 P2RY1P47900 373 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 POLR2HP52434 150 aaKnown RBP12.34□□□□□ -0.43
SF1-201ENST00000227503 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
SF1-201ENST00000227503 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 GINS3Q9BRX5 216 aa12.34□□□□□ -0.43
SF1-201ENST00000227503 DDA1Q9BW61 102 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms