RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ZNF35P13682 527 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 TBPP20226 339 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 PPA1Q15181 289 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 GVQW1Q8N7I0 195 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 BHLHE23Q8NDY6 225 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 LILRB1Q8NHL6 650 aaPredicted RBP12.77□□□□□ -0.36
CCDC47-201ENST00000225726 OCSTAMPQ9BR26 566 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 NPDC1Q9NQX5 325 aaPredicted RBP12.77□□□□□ -0.36
CCDC47-201ENST00000225726 SLC25A15Q9Y619 301 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 ZNF732B4DXR9 585 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 M0QYG6 137 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 NOS1APO75052 506 aaPredicted RBP12.77□□□□□ -0.37
CCDC47-201ENST00000225726 RAC2P15153 192 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 SELEP16581 610 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 GABRR1P24046 479 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
CCDC47-201ENST00000225726 UNQ6126/PRO20091Q6UXV3 157 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 GINS4Q9BRT9 223 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 OR2J1Q9GZK6 312 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.37
CCDC47-201ENST00000225726 PIGMQ9H3S5 423 aa12.77□□□□□ -0.37
CCDC47-201ENST00000225726 ZNF629Q9UEG4 869 aaPredicted RBP12.77□□□□□ -0.37
CCDC47-201ENST00000225726 ANKRD11Q6UB99 2663 aaPredicted RBP12.77□□□□□ -0.37
CCDC47-201ENST00000225726 INTS1Q8N201 2190 aaKnown RBP12.77□□□□□ -0.37
CCDC47-201ENST00000225726 OR5B21A6NL26 309 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 CECR9P0C854 216 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 TUBG1P23258 451 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 OPRM1P35372 400 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 OR1J1Q8NGS3 322 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 SLC25A40Q8TBP6 338 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 POM121Q96HA1 1249 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 A0A1B0GUH1 482 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 MSTNO14793 375 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 ZNF735P0CB33 412 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 ARFRP1Q13795 201 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 OR4S1Q8NGB4 309 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 ASF1BQ9NVP2 202 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 HSF4Q9ULV5 492 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 PLEKHA6Q9Y2H5 1048 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 NOP16Q9Y3C1 178 aaKnown RBP12.76□□□□□ -0.37
CCDC47-201ENST00000225726 LILRA1O75019 489 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 AMY2AP04746 511 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 MPZP25189 248 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 RNASE10Q5GAN6 216 aaKnown RBP12.76□□□□□ -0.37
CCDC47-201ENST00000225726 TIMM23BQ5SRD1 257 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 TMEM200AQ86VY9 491 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 Q8NFD4 153 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 MED28Q9H204 178 aa12.76□□□□□ -0.37
CCDC47-201ENST00000225726 IGHV1-18A0A0C4DH31 117 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 SFTPBP07988 381 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 RAD52P43351 418 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 HAAOP46952 286 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 ERVS71-1P61550 626 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 PRR30Q53SZ7 412 aaPredicted RBP12.75□□□□□ -0.37
CCDC47-201ENST00000225726 MKXQ8IYA7 352 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 BPIFB2Q8N4F0 458 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 SAV1Q9H4B6 383 aaPredicted RBP12.75□□□□□ -0.37
CCDC47-201ENST00000225726 SCP2D1Q9UJQ7 156 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 GNG3P63215 75 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 ACTBL2Q562R1 376 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 METTL11BQ5VVY1 283 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 IQCF6A8MYZ5 107 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 IL5P05113 134 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 RBM11P57052 281 aaKnown RBP12.75□□□□□ -0.37
CCDC47-201ENST00000225726 RBPJQ06330 500 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 C3orf36Q3SXR2 165 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 CD276Q5ZPR3 534 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 OR52W1Q6IF63 320 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 FBXL14Q8N1E6 418 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 SLC2A8Q9NY64 477 aa12.75□□□□□ -0.37
CCDC47-201ENST00000225726 MGAQ8IWI9 3026 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 IGHV2OR16-5A0A0B4J2B6 119 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 PYCARD-AS1I3L0S3 204 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 CA6P23280 308 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ID4P47928 161 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 TAF9Q16594 264 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ST3GAL2Q16842 350 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 PIGYQ3MUY2 71 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 Q5BKY6 102 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ELP2Q6IA86 826 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 C6orf201Q7Z4U5 140 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ZNF573Q86YE8 665 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 C1orf174Q8IYL3 243 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 SLAMF9Q96A28 289 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 S100PBPQ96BU1 408 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 SLC6A7Q99884 636 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 SLC25A21Q9BQT8 299 aaPredicted RBP12.74□□□□□ -0.37
CCDC47-201ENST00000225726 BCL2L14Q9BZR8 327 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 BEX1Q9HBH7 125 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 RANGRFQ9HD47 186 aaPredicted RBP12.74□□□□□ -0.37
CCDC47-201ENST00000225726 SVILO95425 2214 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 ZNF250P15622 560 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 CHATP28329 748 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
CCDC47-201ENST00000225726 GLDNQ6ZMI3 551 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms