RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MPGP29372 298 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 CREB3L2Q70SY1 520 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 TERB2Q8NHR7 220 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 ADGRG7Q96K78 797 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 OR2D2Q9H210 308 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 GIPP09681 153 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-201ENST00000223398 PRRX1P54821 245 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 HLXQ14774 488 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-201ENST00000223398 OR5D13Q8NGL4 314 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 TRAV38-1A0A0B4J264 116 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 SERTM2A0A1B0GWG4 89 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 FGF7P21781 194 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 ACOT6Q3I5F7 207 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-201ENST00000223398 LHX4Q969G2 390 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 KCNK15Q9H427 330 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 SPTA1P02549 2419 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 E5RGE8 158 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 OIP5O43482 229 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 CST7O76096 145 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 NDFIP1Q9BT67 221 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 CNTD2Q9H8S5 307 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 MSL2Q9HCI7 577 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 ICAM5Q9UMF0 924 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 NSG2Q9Y328 171 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 LINC00303Q3SY05 128 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 DEGS2Q6QHC5 323 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 KDF1Q8NAX2 398 aaPredicted RBP16.31■□□□□ 0.2
CLIP2-201ENST00000223398 OR10AC1Q8NH08 325 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 ACTR3CQ9C0K3 210 aaPredicted RBP16.31■□□□□ 0.2
CLIP2-201ENST00000223398 HIST1H1DP16402 221 aaKnown RBP16.31■□□□□ 0.2
CLIP2-201ENST00000223398 ZFP36L2P47974 494 aaKnown RBP16.31■□□□□ 0.2
CLIP2-201ENST00000223398 CLDN20P56880 219 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 TLE1Q04724 770 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 BAGE3Q86Y29 109 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 BAGE2Q86Y30 109 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 PTP4A1Q93096 173 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 C2orf50Q96LR7 162 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 LRFN3Q9BTN0 628 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 GREM1O60565 184 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 PRR27Q6MZM9 219 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 OPN3Q9H1Y3 402 aaPredicted RBP16.31■□□□□ 0.2
CLIP2-201ENST00000223398 UBE2L5PA0A1B0GUS4 154 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 ONECUT2O95948 504 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 OPRK1P41145 380 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 BAK1Q16611 211 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 C1orf185Q5T7R7 199 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 UNC13CQ8NB66 2214 aa16.31■□□□□ 0.2
CLIP2-201ENST00000223398 IGHV1-45A0A0A0MS14 117 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 LPAR6P43657 344 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 PLAC9Q5JTB6 97 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM171Q8WVE6 324 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 TXN2Q99757 166 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 IL36GQ9NZH8 169 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 FUCA1P04066 466 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 GP1BAP07359 652 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 LIMS3P0CW19 117 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 LIMS4P0CW20 117 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 GAB2Q9UQC2 676 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 ACSM4P0C7M7 580 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 SULT1A3P0DMM9 295 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 SULT1A4P0DMN0 295 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 SLC25A40Q8TBP6 338 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 UQCC2Q9BRT2 126 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 OR2H1Q9GZK4 316 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 JTBO76095 146 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM41BQ5BJD5 291 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM229BQ8NBD8 167 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 GNPNAT1Q96EK6 184 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-201ENST00000223398 ZNF385AQ96PM9 386 aaKnown RBP16.3■□□□□ 0.2
CLIP2-201ENST00000223398 MPC1Q9Y5U8 109 aa16.3■□□□□ 0.2
CLIP2-201ENST00000223398 IGHV3OR15-7A0A075B7D8 119 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 OR5B21A6NL26 309 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 CSF2RBP32927 897 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 RPUSD4Q96CM3 377 aaKnown RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 GMPPAQ96IJ6 420 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 MRM2Q9UI43 246 aaKnown RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 DLL1O00548 723 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 HRASP01112 189 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 FBXW9Q5XUX1 488 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 ACSM6Q6P461 480 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 SMIM4Q8WVI0 70 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 ASB5Q8WWX0 329 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM56Q96MV1 263 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 NUP214P35658 2090 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 OR5I1Q13606 314 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 HIST2H3AQ71DI3 136 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 OR2W3Q7Z3T1 314 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 IGKV1-8A0A0C4DH67 115 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 CENPVL1A0A0U1RR11 272 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 CTRB1P17538 263 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 CDC20Q12834 499 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 EIF4EBP2Q13542 120 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 CTRB2Q6GPI1 263 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 TMEM65Q6PI78 240 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 ACOT7LQ6ZUV0 252 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 MOB1BQ7L9L4 216 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 MDP1Q86V88 176 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 EXOGQ9Y2C4 368 aaKnown RBP16.29■□□□□ 0.2
CLIP2-201ENST00000223398 PLPP2O43688 288 aa16.29■□□□□ 0.2
CLIP2-201ENST00000223398 PDCD6O75340 191 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms