RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BCL3P20749 454 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 NPBWR2P48146 333 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 CLDN12P56749 244 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 P2RY14Q15391 338 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 RAB11BQ15907 218 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 GLIPR1L1Q6UWM5 242 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 LRRC75A-AS1Q8N1F1 130 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 ZSCAN4Q8NAM6 433 aaPredicted RBP22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 OR6M1Q8NGM8 313 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 OR10K1Q8NGX5 313 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 SEH1LQ96EE3 360 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 RSL24D1Q9UHA3 163 aaKnown RBP22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 CSMD1Q96PZ7 3565 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 PDZD2O15018 2839 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 IFITM5A6NNB3 132 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 SRRM5B3KS81 715 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 PPIHO43447 177 aaKnown RBP22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 LHBP01229 141 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 CALCBP10092 127 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 CD37P11049 281 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 SLC2A2P11168 524 aaPredicted RBP22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 CFHR2P36980 270 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 PDLIM4P50479 330 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 RIN1Q13671 783 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 RSU1Q15404 277 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 SFRP4Q6FHJ7 346 aaPredicted RBP22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 SFXN4Q6P4A7 337 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 SAXO1Q8IYX7 474 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 NRIP2Q9BQI9 281 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 RBFOX1Q9NWB1 397 aaKnown RBP22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 NXPH2O95156 264 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 GLRA1P23415 457 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 AVPI1Q5T686 147 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 CLEC2AQ6UVW9 174 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 PXT1Q8NFP0 134 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 DAPK2Q9UIK4 370 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 NPTNQ9Y639 398 aa22.9■■□□□ 1.26
CHMP4B-201ENST00000217402 AIPO00170 330 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 SFTPBP07988 381 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 SLC22A6Q4U2R8 563 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 FAM166AQ6J272 317 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 FAM168AQ92567 244 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 METTL9Q9H1A3 318 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 KCNK15Q9H427 330 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 STEAP1Q9UHE8 339 aa22.89■■□□□ 1.25
CHMP4B-201ENST00000217402 IGHV3OR15-7A0A075B7D8 119 aa22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 NOS1APO75052 506 aaPredicted RBP22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 KDM4BO94953 1096 aa22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 SERPINA2P20848 420 aa22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 Q5PR19 223 aa22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 PEG10Q86TG7 708 aaKnown RBP22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 DEFB108BQ8NET1 73 aa22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 EMG1Q92979 244 aaKnown RBP22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 SLC25A28Q96A46 364 aa22.88■■□□□ 1.25
CHMP4B-201ENST00000217402 A0A0B4J203 849 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 ERVK11-1P61568 191 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 ZMYND11Q15326 602 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 FOXB2Q5VYV0 432 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 ASCL4Q6XD76 172 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 TBC1D15Q8TC07 691 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 SLC25A46Q96AG3 418 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 TIMD4Q96H15 378 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 C1orf147Q96MC9 270 aaPredicted RBP22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 NDUFA13Q9P0J0 144 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 DNAJB11Q9UBS4 358 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 WIPI2Q9Y4P8 454 aa22.87■■□□□ 1.25
CHMP4B-201ENST00000217402 PPIAL4EA0A075B759 164 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 PPIAL4DF5H284 164 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 HTR3BO95264 441 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 ACAA1P09110 424 aaPredicted RBP22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 CSF3P09919 207 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 PPIAL4FP0DN26 164 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 GPR6P46095 362 aaPredicted RBP22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 SNU13P55769 128 aaKnown RBP22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 TMEM33P57088 247 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 BTG1P62324 171 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 CLEC12BQ2HXU8 276 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 IDNKQ5T6J7 187 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 Q8IYB0 196 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 IL36RNQ9UBH0 155 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 PPIAL4AQ9Y536 164 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 A0A1W2PP11 408 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 ISPDA4D126 451 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 ARSBP15848 533 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 PRKACAP17612 351 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 SMIM21Q3B7S5 101 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 ACP7Q6ZNF0 438 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 OR51D1Q8NGF3 324 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 RAB1CQ92928 201 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 FAM46BQ96A09 425 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 LIN7BQ9HAP6 207 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 HES4Q9HCC6 221 aa22.86■■□□□ 1.25
CHMP4B-201ENST00000217402 OOEPA6NGQ2 149 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 CSTBP04080 98 aaKnown RBP22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 DGUOKQ16854 277 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 OR10K2Q6IF99 312 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 FAM58AQ8N1B3 248 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 OR5T2Q8NGG2 359 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 C10orf105Q8TEF2 133 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms