RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TREM2Q9NZC2 230 aa14.8□□□□□ -0.04
PHGDH-230ENST00000641927 PTTG2Q9NZH5 202 aa14.8□□□□□ -0.04
PHGDH-230ENST00000641927 FASNP49327 2511 aaKnown RBP14.79□□□□□ -0.04
PHGDH-230ENST00000641927 RAI1Q7Z5J4 1906 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-230ENST00000641927 J3QT63 122 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 SYNGR1O43759 233 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 RHBDL1O75783 438 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 PAHP00439 452 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 CD37P11049 281 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 SNRPBP14678 240 aaKnown RBP14.79□□□□□ -0.04
PHGDH-230ENST00000641927 RSU1Q15404 277 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 SLC22A6Q4U2R8 563 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 FAM166AQ6J272 317 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 MCFD2Q8NI22 146 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 AQP3Q92482 292 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 FAM3DQ96BQ1 224 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 PKIBQ9C010 78 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 SLIRPQ9GZT3 109 aaKnown RBP14.79□□□□□ -0.04
PHGDH-230ENST00000641927 POLDIP2Q9Y2S7 368 aa14.79□□□□□ -0.04
PHGDH-230ENST00000641927 ARFGEF3Q5TH69 2177 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 GMFBP60983 142 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 IL24Q13007 206 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 OR10K1Q8NGX5 313 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 SLC25A28Q96A46 364 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 C6orf62Q9GZU0 229 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-230ENST00000641927 METTL9Q9H1A3 318 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 KCNK15Q9H427 330 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 GCM1Q9NP62 436 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 COMMD3Q9UBI1 195 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 PPP1R3CQ9UQK1 317 aa14.78□□□□□ -0.04
PHGDH-230ENST00000641927 CDC14BO60729 498 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 PTBP3O95758 552 aaKnown RBP14.77□□□□□ -0.04
PHGDH-230ENST00000641927 SERPINA2P20848 420 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 CFPP27918 469 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 C2orf76Q3KRA6 126 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 ZNF404Q494X3 552 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 C11orf53Q8IXP5 236 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 TBC1D15Q8TC07 691 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 LGALS14Q8TCE9 139 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 NRGNQ92686 78 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 FAM46BQ96A09 425 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 KCTD12Q96CX2 325 aaKnown RBP14.77□□□□□ -0.04
PHGDH-230ENST00000641927 ZNF488Q96MN9 340 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 TLNRD1Q9H1K6 362 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 ABRACLQ9P1F3 81 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 CACNA1DQ01668 2161 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 DSCAMO60469 2012 aa14.77□□□□□ -0.04
PHGDH-230ENST00000641927 IGKV1-12A0A0C4DH73 117 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 TRAPPC2LH3BP13 241 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 RGS5O15539 181 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 HTR3BO95264 441 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 BPNT1O95861 308 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 IGKV1D-12P01611 117 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 HPXP02790 462 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 CSTBP04080 98 aaKnown RBP14.77□□□□□ -0.05
PHGDH-230ENST00000641927 UBBP0CG47 229 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 BCL3P20749 454 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 MPZP25189 248 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 RBMXP38159 391 aaKnown RBP14.77□□□□□ -0.05
PHGDH-230ENST00000641927 RANBP1P43487 201 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 GATA4P43694 442 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 OR10K2Q6IF99 312 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 MZT2AQ6P582 158 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 WDR82Q6UXN9 313 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 ZSCAN4Q8NAM6 433 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-230ENST00000641927 PXT1Q8NFP0 134 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 ACOT12Q8WYK0 555 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 MRI1Q9BV20 369 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 LIME1Q9H400 295 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 MTCH1Q9NZJ7 389 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 OR5V1Q9UGF6 321 aa14.77□□□□□ -0.05
PHGDH-230ENST00000641927 H7C417 338 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 AKR7A2O43488 359 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 TMEM127O75204 238 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 CRTAPO75718 401 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-230ENST00000641927 CALCBP10092 127 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 IRF2P14316 349 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 NPBWR2P48146 333 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 SAXO1Q8IYX7 474 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 BOLLQ8N9W6 283 aaKnown RBP14.76□□□□□ -0.05
PHGDH-230ENST00000641927 OR5H6Q8NGV6 325 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 OR11L1Q8NGX0 322 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 LRRC29Q8WV35 223 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 ERGIC1Q969X5 290 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 CEP19Q96LK0 163 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 CST11Q9H112 138 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 CXorf56Q9H5V9 222 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 GHRLQ9UBU3 117 aa14.76□□□□□ -0.05
PHGDH-230ENST00000641927 KDM4BO94953 1096 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 SFTPBP07988 381 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 VSIG8P0DPA2 414 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 BMXP51813 675 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 CAPZA1P52907 286 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 CHD3Q12873 2000 aaKnown RBP14.75□□□□□ -0.05
PHGDH-230ENST00000641927 GPR176Q14439 515 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 SAMD12Q8N8I0 201 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 NEU4Q8WWR8 484 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-230ENST00000641927 CCL17Q92583 94 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 TSC22D3Q99576 134 aa14.75□□□□□ -0.05
PHGDH-230ENST00000641927 GAL3ST1Q99999 423 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms