RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
PHGDH-213ENST00000641272 OR8B4Q96RC9 309 aa13.59□□□□□ -0.23
PHGDH-213ENST00000641272 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-213ENST00000641272 MROQ9BYG7 248 aa13.59□□□□□ -0.23
PHGDH-213ENST00000641272 OR14J1Q9UGF5 321 aa13.59□□□□□ -0.23
PHGDH-213ENST00000641272 ENPP5Q9UJA9 477 aa13.59□□□□□ -0.23
PHGDH-213ENST00000641272 A6NIN4 97 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 G3V4G9 280 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 H3BSH0 61 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 GSC2O15499 205 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 MTRF1O75570 445 aaKnown RBP13.58□□□□□ -0.24
PHGDH-213ENST00000641272 TTRP02766 147 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 HAAOP46952 286 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 RIDAP52758 137 aaKnown RBP13.58□□□□□ -0.24
PHGDH-213ENST00000641272 EFNB2P52799 333 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 RPL31P62899 125 aaKnown RBP13.58□□□□□ -0.24
PHGDH-213ENST00000641272 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF684Q5T5D7 378 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
PHGDH-213ENST00000641272 CNN2Q99439 309 aaKnown RBP13.58□□□□□ -0.24
PHGDH-213ENST00000641272 NUFIP1Q9UHK0 495 aaKnown RBP13.58□□□□□ -0.24
PHGDH-213ENST00000641272 AQP12BA6NM10 295 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 J3QT63 122 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 SLC1A7O00341 560 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 PRKYO43930 277 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 FKBP6O75344 327 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 DHRS3O75911 302 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 NRASP01111 189 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 IGLV3-1P01715 115 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 PRB2P02812 416 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-213ENST00000641272 VSIG10L2P0DP72 767 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 ANXA8P13928 327 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 FLOT2Q14254 428 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 ASRGL1Q7L266 308 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 LHFPL4Q7Z7J7 247 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 AQP12AQ8IXF9 295 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF679Q8IYX0 411 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 OR5A2Q8NGI9 324 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
PHGDH-213ENST00000641272 C1orf21Q9H246 121 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 FBLN5Q9UBX5 448 aa13.57□□□□□ -0.24
PHGDH-213ENST00000641272 LOC110117498-PIK3R3F6TDL0 507 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 NXPH2O95156 264 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 PGA5P0DJD9 388 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 CXCR4P61073 352 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 HABP2Q14520 560 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-213ENST00000641272 BCL2L15Q5TBC7 163 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 TMEM200BQ69YZ2 307 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 OR2T27Q8NH04 317 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 OR5K1Q8NHB7 308 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 OR2T6Q8NHC8 308 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 APOL4Q9BPW4 351 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 TEX12Q9BXU0 123 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 PAPOLBQ9NRJ5 636 aaKnown RBP13.56□□□□□ -0.24
PHGDH-213ENST00000641272 USE1Q9NZ43 259 aa13.56□□□□□ -0.24
PHGDH-213ENST00000641272 MEGF11A6BM72 1044 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ACOD1A6NK06 481 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 INMTO95050 263 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 PRDX2P32119 198 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 CRISP1P54107 249 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ROM1Q03395 351 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ODF4Q2M2E3 257 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 DEGS2Q6QHC5 323 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF322Q6U7Q0 402 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-213ENST00000641272 SLC35F2Q8IXU6 374 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 DYNAPQ8N1N2 210 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF561Q8N587 486 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 ASCC1Q8N9N2 400 aaKnown RBP13.55□□□□□ -0.24
PHGDH-213ENST00000641272 FAM234AQ9H0X4 552 aa13.55□□□□□ -0.24
PHGDH-213ENST00000641272 PLXNB1O43157 2135 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 PQLC2LA1A4F0 135 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 MITFO75030 526 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-213ENST00000641272 SRSF10O75494 262 aaKnown RBP13.54□□□□□ -0.24
PHGDH-213ENST00000641272 FAM107AO95990 144 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 LGALS4P56470 323 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 CLVS2Q5SYC1 327 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 ZBTB37Q5TC79 503 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 CRIP3Q6Q6R5 217 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 KRT74Q7RTS7 529 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 ANGPTL5Q86XS5 388 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 TMEM219Q86XT9 240 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF573Q86YE8 665 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 CALHM1Q8IU99 346 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 C11orf42Q8N5U0 333 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 ASB17Q8WXJ9 295 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 TBX5Q99593 518 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 NRIP2Q9BQI9 281 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 NPFFR1Q9GZQ6 430 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 MEGF9Q9H1U4 602 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 HEXA-AS1Q9H8Q6 139 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 MOB1AQ9H8S9 216 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 RASL12Q9NYN1 266 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 DNAJB9Q9UBS3 223 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 OR52A1Q9UKL2 312 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 SLC22A13Q9Y226 551 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 POLDIP2Q9Y2S7 368 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 R4GMQ9 66 aa13.54□□□□□ -0.24
PHGDH-213ENST00000641272 DSCAML1Q8TD84 2053 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms