RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 NUPL2O15504 423 aaKnown RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 PRKNO60260 465 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 OR8U8P0C7N1 319 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 GNG10P50151 68 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 HCCSP53701 268 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 PLAURQ03405 335 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 TSPAN31Q12999 210 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 TBCEQ15813 527 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 RNF212Q495C1 297 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 BEX1Q9HBH7 125 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 RCE1Q9Y256 329 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 PTGDR2Q9Y5Y4 395 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ARHGAP32A7KAX9 2087 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 NRXN2Q9P2S2 1712 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 GBF1Q92538 1859 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 A0A087WUJ7 227 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 TFP02787 698 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 CHRM2P08172 466 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 SLC25A6P12236 298 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 RPL31P62899 125 aaKnown RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 H3F3AP84243 136 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 BATFQ16520 125 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 TP53I3Q53FA7 332 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ADGRG5Q8IZF4 528 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 OR4M1Q8NGD0 313 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 OR2AE1Q8NHA4 323 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 CANT1Q8WVQ1 401 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 WBP1Q96G27 269 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 POM121L2Q96KW2 1035 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 OPALINQ96PE5 141 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF300Q96RE9 604 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 C1QTNF3Q9BXJ4 246 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 PRSS22Q9GZN4 317 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ARL6Q9H0F7 186 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 CXorf36Q9H7Y0 433 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ZMAT4Q9H898 229 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 IL36GQ9NZH8 169 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 SLCO1B1Q9Y6L6 691 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ARPC3O15145 178 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF32P17041 273 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 TNFRSF1BP20333 461 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 HOXD11P31277 338 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 GABRA5P31644 462 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 FUT6P51993 359 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 FNDC1Q4ZHG4 1894 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 SLC35D3Q5M8T2 416 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 NKAIN3Q8N8D7 197 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 PCNPQ8WW12 178 aaKnown RBP4.46□□□□□ -1.7
SCN1A-218ENST00000640036 RAB3CQ96E17 227 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 ALG14Q96F25 216 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 WACQ9BTA9 647 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 KCNK15Q9H427 330 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 FKBP11Q9NYL4 201 aa4.46□□□□□ -1.7
SCN1A-218ENST00000640036 MS4A18H0YCH9 400 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 SDHDO14521 159 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 PTGFRP43088 359 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 PGGHGQ32M88 737 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 MS4A18Q3C1V0 323 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 KHDC1Q4VXA5 237 aaKnown RBP4.45□□□□□ -1.7
SCN1A-218ENST00000640036 FAM71E1Q6IPT2 247 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 WDR88Q6ZMY6 472 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 Q71RC1 249 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-218ENST00000640036 CATSPERDQ86XM0 798 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 PELI3Q8N2H9 469 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 C11orf68Q9H3H3 251 aaKnown RBP4.45□□□□□ -1.7
SCN1A-218ENST00000640036 OAZ3Q9UMX2 235 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 TRAV18A0A075B6X5 111 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 IGHV1-69-2A0A0G2JMI3 117 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 TEX50A0A1B0GTY4 177 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 AQP7P3A6NL99 342 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 C21orf58P58505 322 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 MADCAM1Q13477 382 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF404Q494X3 552 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF385BQ569K4 471 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 Q5PR19 223 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 RNLSQ5VYX0 342 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 EGLN2Q96KS0 407 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 S100A14Q9HCY8 104 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 A4GALTQ9NPC4 353 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 SLC25A10Q9UBX3 287 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-218ENST00000640036 RPH3ALQ9UNE2 315 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 ADAMTSL1Q8N6G6 1762 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 A0A1W2PN81 502 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 E5RGE8 158 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 TXNL1O43396 289 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 TMPRSS11DO60235 418 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 PTTG1O95997 202 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 GAAP10253 952 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 CHRNA7P36544 502 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 CA7P43166 264 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 GGNBP1Q5YKI7 109 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 SLC25A26Q70HW3 274 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 TGIF2Q9GZN2 237 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 IKZF5Q9H5V7 419 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 BET1LQ9NYM9 111 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 EHFQ9NZC4 300 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 SLC23A1Q9UHI7 598 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 OSGIN1Q9UJX0 560 aa4.45□□□□□ -1.7
SCN1A-218ENST00000640036 GPR55Q9Y2T6 319 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-218ENST00000640036 MPC1Q9Y5U8 109 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms