RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ARHGAP21Q5T5U3 1957 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 CEACAM18A8MTB9 384 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 SERPINE3A8MV23 424 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 FOXG1P55316 489 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-215ENST00000639856 MTCP1P56278 107 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 NHLH1Q02575 133 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 FOXC1Q12948 553 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 SKA3Q8IX90 412 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 PCNPQ8WW12 178 aaKnown RBP13.1□□□□□ -0.31
TRIM3-215ENST00000639856 MFFQ9GZY8 342 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 BCO1Q9HAY6 547 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 TRAV17A0A0B4J275 112 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 DUS4LO95620 317 aaKnown RBP13.09□□□□□ -0.31
TRIM3-215ENST00000639856 AKR1C4P17516 323 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 AMY2BP19961 511 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 VAMP1P23763 118 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 AGTR1P30556 359 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 P2RX3P56373 397 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 TAS2R31P59538 309 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 NRN1LQ496H8 165 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 OR5H2Q8NGV7 314 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 CPNE2Q96FN4 548 aaPredicted RBP13.09□□□□□ -0.31
TRIM3-215ENST00000639856 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 ACACAQ13085 2346 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 CCSO14618 274 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 CA11O75493 328 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
TRIM3-215ENST00000639856 TMEM225BP0DP42 221 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 PRKACBP22694 351 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 CNN3Q15417 329 aaKnown RBP13.09□□□□□ -0.31
TRIM3-215ENST00000639856 TMEM65Q6PI78 240 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 NUFIP2Q7Z417 695 aaKnown RBP13.09□□□□□ -0.31
TRIM3-215ENST00000639856 ZNF546Q86UE3 836 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 ST6GALNAC5Q9BVH7 336 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 RGCCQ9H4X1 137 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 SVILO95425 2214 aa13.09□□□□□ -0.31
TRIM3-215ENST00000639856 DMXL2Q8TDJ6 3036 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF724A8MTY0 619 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 TPD52L2O43399 206 aaKnown RBP13.08□□□□□ -0.32
TRIM3-215ENST00000639856 B3GALNT1O75752 331 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 MMP7P09237 267 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-215ENST00000639856 OR3A2P47893 321 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 SNU13P55769 128 aaKnown RBP13.08□□□□□ -0.32
TRIM3-215ENST00000639856 TAS2R46P59540 309 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 TMEM42Q69YG0 159 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 RTL6Q6ICC9 239 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 GSG1LQ6UXU4 331 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 Q96M66 194 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 LINC00470Q9BZP3 86 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 PARPBPQ9NWS1 579 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 COMMD9Q9P000 198 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 KIF25Q9UIL4 384 aa13.08□□□□□ -0.32
TRIM3-215ENST00000639856 FAM230AA0A1W2PPH8 454 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 RRASP10301 218 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 ARF1P84077 181 aaKnown RBP13.07□□□□□ -0.32
TRIM3-215ENST00000639856 PPA1Q15181 289 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 RNPS1Q15287 305 aaKnown RBP13.07□□□□□ -0.32
TRIM3-215ENST00000639856 COMMD7Q86VX2 200 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 LHFPL1Q86WI0 220 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 TMEM17Q86X19 198 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 MCEMP1Q8IX19 187 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 TMEM185AQ8NFB2 350 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 CASTOR1Q8WTX7 329 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 MARVELD3Q96A59 401 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 SEC22AQ96IW7 307 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 METTL9Q9H1A3 318 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 IGKV1-27A0A075B6S5 117 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 A0A096LPE4 126 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 hCG_38984A0A1B0GV85 526 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 A0A1W2PPZ6 126 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 SLC22A20A6NK97 555 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 NRASP01111 189 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 IGHG3P01860 377 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 RBP2P50120 134 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 NPY4RP50391 375 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 FAM3AP98173 230 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 C11orf87Q6NUJ2 197 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 PEG10Q86TG7 708 aaKnown RBP13.07□□□□□ -0.32
TRIM3-215ENST00000639856 CSNK2A3Q8NEV1 391 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 OR6K3Q8NGY3 331 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 APH1AQ96BI3 265 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 SCGB3A2Q96PL1 93 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 C5orf66Q9H5L9 145 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 C12orf49Q9H741 205 aa13.07□□□□□ -0.32
TRIM3-215ENST00000639856 CACNA1GO43497 2377 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 CSTBP04080 98 aaKnown RBP13.06□□□□□ -0.32
TRIM3-215ENST00000639856 PDGFAP04085 211 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 SLC25A4P12235 298 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 GABRR1P24046 479 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 FPR2P25090 351 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 MPGP29372 298 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 CALCRP30988 508 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 PRSS12P56730 875 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms